RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	KRTAP3-3	Q9BYR6	98 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	KRTAP3-2	Q9BYR7	98 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	SH3GLB2	Q9NR46	395 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	VPS54	Q9P1Q0	977 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	DDX41	Q9UJV9	622 aa	Known RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	PCDHA6	Q9UN73	950 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	PCDHA8	Q9Y5H6	950 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	STK36	Q9NRP7	1315 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	MYH6	P13533	1939 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369		A0A1W2PQ45	241 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369		A0A1W2PQY0	241 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369		A6NJR5	290 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	SPATA31C2	B4DYI2	1134 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	DTNB	O60941	627 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	CDKL5	O76039	1030 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	DEXI	O95424	95 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	FOS	P01100	380 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	TGFB3	P10600	412 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	MYCL	P12524	364 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	FDPS	P14324	419 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	ITGB5	P18084	799 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	ICAM3	P32942	547 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	BEX3	Q00994	111 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	AKAP17A	Q02040	695 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	SP2	Q02086	613 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	SEMA3F	Q13275	785 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	AP3B2	Q13367	1082 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	TTLL4	Q14679	1199 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	NPY5R	Q15761	445 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	FSCN1	Q16658	493 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	LY6K	Q17RY6	165 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	LRRC26	Q2I0M4	334 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	TSR1	Q2NL82	804 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	GNAS	Q5JWF2	1037 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	C1orf53	Q5VUE5	145 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	NOL8	Q76FK4	1167 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	CRYGN	Q8WXF5	182 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	COPS5	Q92905	334 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	EMID1	Q96A84	441 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	FERMT2	Q96AC1	680 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	GLT8D2	Q9H1C3	349 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	SPC25	Q9HBM1	224 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	TMEM260	Q9NX78	707 aa		11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	RANBP2	P49792	3224 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-221	ENST00000456369	SPDYE3	A6NKU9	549 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369		M0R2N6	131 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	ASGR1	P07306	291 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	GNA11	P29992	359 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	SREBF1	P36956	1147 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	LSM11	P83369	360 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	ARHGAP1	Q07960	439 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	DMRTA1	Q5VZB9	504 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	KCNV1	Q6PIU1	500 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	SLC39A5	Q6ZMH5	540 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	FAM177A1	Q8N128	213 aa	Predicted RBP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	PCSK9	Q8NBP7	692 aa	Known RBP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	NSUN7	Q8NE18	718 aa	Known RBP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	AP5M1	Q9H0R1	490 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	C6orf50	Q9HD87	102 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	RTEL1	Q9NZ71	1219 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	UBIAD1	Q9Y5Z9	338 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	FRMPD3	Q5JV73	1810 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	MCM3AP	O60318	1980 aa		11.36	□□□□□ -0.59
CHEK2-221	ENST00000456369	ELP1	O95163	1332 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	FIBP	O43427	364 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	EDIL3	O43854	480 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	UBA1	P22314	1058 aa	Known RBP	11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	MYSM1	Q5VVJ2	828 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	CXCL17	Q6UXB2	119 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	REXO1	Q8N1G1	1221 aa	Known RBP	11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	DAGLB	Q8NCG7	672 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	CCDC148	Q8NFR7	591 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	OR6J1	Q8NGC5	347 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	DPF3	Q92784	378 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	PGBD1	Q96JS3	809 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	ANO3	Q9BYT9	981 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	BCAS3	Q9H6U6	928 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	MRVI1	Q9Y6F6	885 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	GRIN2D	O15399	1336 aa		11.35	□□□□□ -0.59
CHEK2-221	ENST00000456369	JAK2	O60674	1132 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	BRD1	O95696	1058 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GH1	P01241	217 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	HOXD8	P13378	290 aa	Predicted RBP	11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	COL9A1	P20849	921 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	CPT1A	P50416	773 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	CDK7	P50613	346 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	NLRP5	P59047	1200 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	PURA	Q00577	322 aa	Known RBP	11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	LAMC2	Q13753	1193 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GNPTAB	Q3T906	1256 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	CELF3	Q5SZQ8	465 aa	Known RBP	11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	JAKMIP3	Q5VZ66	844 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	MCTP2	Q6DN12	878 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GALNT17	Q6IS24	598 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	SLC43A3	Q8NBI5	491 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	PPTC7	Q8NI37	304 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	CYP2W1	Q8TAV3	490 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms