RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 UBE2Q2LH0YL09 131 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 K7ERI5 159 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 CEP104O60308 925 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 FDX1P10109 184 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 TNNC1P63316 161 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 FASTKD5Q7L8L6 764 aaKnown RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 CARD6Q9BX69 1037 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 NBPF3Q9H094 633 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 HPS5Q9UPZ3 1129 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 CEP55Q53EZ4 464 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 NLRP7Q8WX94 980 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 MAK16Q9BXY0 300 aaKnown RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 ZNF215Q9UL58 517 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 GOLGA8IPA6NC78 632 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 GOLGA8JA6NMD2 632 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 EVCP57679 992 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 ZBTB33Q86T24 672 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 FCER1AP12319 257 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 ECE1P42892 770 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 MAN2A1Q16706 1144 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 LRRC8AQ8IWT6 810 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 JMJD4Q9H9V9 463 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 RGL2O15211 777 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 KIAA0754O94854 1291 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 ATP2C1P98194 919 aaPredicted RBP14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 BMS1Q14692 1282 aaKnown RBP14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 SWSAP1Q6NVH7 229 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 PEX26Q7Z412 305 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 FOXN1O15353 648 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 USP11P51784 963 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 JAK3P52333 1124 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 PPP2R3AQ06190 1150 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 PADI6Q6TGC4 694 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 VGLL2Q8N8G2 317 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 SH2D3AQ9BRG2 576 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 TMEM206Q9H813 350 aa14.36□□□□□ -0.11
PTPRN2-202ENST00000389416 MYL7Q01449 175 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 KRT76Q01546 638 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 SFR1Q86XK3 245 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 RRAGDQ9NQL2 400 aaPredicted RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 PALM3A6NDB9 673 aaPredicted RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 LRRN2O75325 713 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.111e-7■■■□□ 18.2
PTPRN2-202ENST00000389416 VAV2P52735 878 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 ZNF668Q96K58 619 aaPredicted RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 DISP2A7MBM2 1401 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 BAZ2BQ9UIF8 2168 aaKnown RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 HSF2BPO75031 334 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 DDNO94850 711 aaPredicted RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 PSMD2Q13200 908 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 UNC13DQ70J99 1090 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 RSPH3Q86UC2 560 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 MMP19Q99542 508 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 RGL1Q9NZL6 768 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 CNTNAP5Q8WYK1 1306 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 NFX1Q12986 1120 aaKnown RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 SLC17A8Q8NDX2 589 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 NT5C1BQ96P26 610 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 EPN1Q9Y6I3 576 aaPredicted RBP14.35□□□□□ -0.11
PTPRN2-202ENST00000389416 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 AFPP02771 609 aaKnown RBP14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 YWHAEP62258 255 aaKnown RBP14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 RPS6KA1Q15418 735 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 UBL4BQ8N7F7 174 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 RPS6KC1Q96S38 1066 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 ATG4CQ96DT6 458 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 TRIM31Q9BZY9 425 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 BUB1O43683 1085 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 INPP5BP32019 993 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 LACTBP83111 547 aaPredicted RBP14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 CALCOCO2Q13137 446 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
PTPRN2-202ENST00000389416 STXBP3O00186 592 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 P4HBP07237 508 aaKnown RBP14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 NEDD9Q14511 834 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 USP49Q70CQ1 688 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 LXNQ9BS40 222 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms