RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 DUSP9Q99956 384 aaKnown RBP13.47□□□□□ -0.25
HMGCL-202ENST00000374487 MRPL44Q9H9J2 332 aaKnown RBP13.47□□□□□ -0.25
HMGCL-202ENST00000374487 KIF5CO60282 957 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 MTIF2P46199 727 aaKnown RBP13.47□□□□□ -0.25
HMGCL-202ENST00000374487 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 HAS1Q92839 578 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGCL-202ENST00000374487 ZNF112Q9UJU3 913 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
HMGCL-202ENST00000374487 B4DLN1 442 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
HMGCL-202ENST00000374487 FANCGO15287 622 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 MAP2K2P36507 400 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 DCAF15Q66K64 600 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 SIAH1Q8IUQ4 282 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
HMGCL-202ENST00000374487 OR8K1Q8NGG5 319 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 GJA10Q969M2 543 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
HMGCL-202ENST00000374487 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 AMNQ9BXJ7 453 aa13.46□□□□□ -0.25
HMGCL-202ENST00000374487 SIPA1L1O43166 1804 aa13.46□□□□□ -0.26
HMGCL-202ENST00000374487 TTC26A0AVF1 554 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 GH2P01242 217 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 FECHP22830 423 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 USP11P51784 963 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 COBLL1Q53SF7 1204 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 KIAA0895Q8NCT3 520 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 UBXN4Q92575 508 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 DDX12PQ92771 950 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-202ENST00000374487 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
HMGCL-202ENST00000374487 R3HDMLQ9H3Y0 253 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-202ENST00000374487 CSADQ9Y600 493 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 IRF6O14896 467 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 TRPA1O75762 1119 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 NDUFB10O96000 172 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 DGKZQ13574 1117 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 TMEM119Q4V9L6 283 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 UIMC1Q96RL1 719 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 PTPN18Q99952 460 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 ANO3Q9BYT9 981 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
HMGCL-202ENST00000374487 KDM3AQ9Y4C1 1321 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
HMGCL-202ENST00000374487 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
HMGCL-202ENST00000374487 BMP3P12645 472 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 TRIM21P19474 475 aaKnown RBP13.44□□□□□ -0.26
HMGCL-202ENST00000374487 SNAP25P60880 206 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 ERVK-24P63145 666 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 USH1GQ495M9 461 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 FKBP15Q5T1M5 1219 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 CENPPQ6IPU0 288 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 LRRN4CLQ8ND94 238 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
HMGCL-202ENST00000374487 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 MYH4Q9Y623 1939 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
HMGCL-202ENST00000374487 PSMD2Q13200 908 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 SYDE2Q5VT97 1194 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 KCNK18Q7Z418 384 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 FEZ1Q99689 392 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 CAPN11Q9UMQ6 739 aa13.44□□□□□ -0.26
HMGCL-202ENST00000374487 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-202ENST00000374487 MEIS2O14770 477 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 LBX1P52954 281 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 MAP2K1Q02750 393 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-202ENST00000374487 ECM1Q16610 540 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 GUF1Q8N442 669 aaKnown RBP13.43□□□□□ -0.26
HMGCL-202ENST00000374487 RETREG2Q8NC44 543 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 SLF1Q9BQI6 1058 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
HMGCL-202ENST00000374487 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
HMGCL-202ENST00000374487 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 SPDYE5A6NIY4 337 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 EFCAB8A8MWE9 144 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 CYP3A7P24462 503 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms