RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 INPP4AQ96PE3 977 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 BLOC1S4Q9NUP1 217 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 KDM3AQ9Y4C1 1321 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DHX15O43143 795 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ATP9AO75110 1047 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 STAM2O75886 525 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RGS20O76081 388 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SMC2O95347 1197 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SARSP49591 514 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 NLRP12P59046 1061 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GRM1Q13255 1194 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ITGB3BPQ13352 177 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 TAF1CQ15572 869 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 NT5DC1Q5TFE4 455 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 C11orf57Q6ZUT1 292 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 KCNK18Q7Z418 384 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CATSPER3Q86XQ3 398 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GPRASP2Q96D09 838 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 NT5C3AQ9H0P0 336 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 STK17AQ9UEE5 414 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MAN1B1Q9UKM7 699 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DNAJC25-GNG10A0A024R161 153 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SLC26A4O43511 780 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 INHBEP58166 350 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SEMA3FQ13275 785 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FAM110CQ1W6H9 321 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 B3GNT9Q6UX72 402 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SPATA20Q8TB22 786 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 LARP4BQ92615 738 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RAD54LQ92698 747 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 EIF2AK1Q9BQI3 630 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MAGEF1Q9HAY2 307 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CPA4Q9UI42 421 aa16.54■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MAFGO15525 162 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RPA1P27694 616 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PDE4DQ08499 809 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MCM6Q14566 821 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DPCR1Q3MIW9 517 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FGD4Q96M96 766 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 TBC1D22BQ9NU19 505 aa16.53■□□□□ 0.24
CDK5RAP3-201ENST00000338399 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 EDNRBP24530 442 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GNPTABQ3T906 1256 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FAM200AQ8TCP9 573 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 POLR3CQ9BUI4 534 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RGL1Q9NZL6 768 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MCM3APO60318 1980 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 POTEFA5A3E0 1075 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 E9PMD0 336 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 YY1P25490 414 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZNF165P49910 485 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SREBF2Q12772 1141 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 EPHA7Q15375 998 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 POTEGQ6S5H5 508 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DYDC2Q96IM9 177 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CBX8Q9HC52 389 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 LRRC37A2A6NM11 1700 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.23
CDK5RAP3-201ENST00000338399 B4DLN1 442 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 BMP6P22004 513 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 AMPD3Q01432 767 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MORC3Q14149 939 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SPATA31C2B4DYI2 1134 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 STRNO43815 780 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SLITRK3O94933 977 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CAVIN2O95810 425 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MYL1P05976 194 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 KCNA2P16389 499 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ADORA2AP29274 412 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 PSMC6P62333 389 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms