RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Gng11P61953 73 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 YdjcQ14BV6 310 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Nlrp4cQ3TKR3 982 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Thrap3Q569Z6 951 aaKnown RBP16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tsg101Q61187 391 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 EregQ61521 162 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Bri3bpQ8BXV2 253 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 GanQ8CA72 597 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Rbm41Q8JZV4 413 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Spata4Q8K3V1 295 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Stap2Q8R0L1 411 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Rpap2Q8VC34 614 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 NkapQ9D0F4 415 aaKnown RBP16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Eya4Q9Z191 616 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fam205aA2APU8 1308 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Cntnap5cQ0V8T7 1305 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Ppp1r9aH3BJD6 1292 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Magea6O89010 325 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Eps15P42567 897 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Magea3Q6T340 320 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 MtrrQ8C1A3 696 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Kcnv2Q8CFS6 562 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Bbs7Q8K2G4 715 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Slc25a38Q91XD8 326 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fsip1Q9D3V5 435 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Eef1gQ9D8N0 437 aaKnown RBP16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 CoasyQ9DBL7 563 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 SetQ9EQU5 289 aaKnown RBP16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Ripor3A1L3T7 938 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 ByslO54825 436 aaKnown RBP16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Hoxc13P50207 328 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Zc3h15Q3TIV5 426 aaKnown RBP16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tfcp2l1Q3UNW5 479 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Naa35Q6PHQ8 725 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 PpihQ9D868 188 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fam217aQ9D9W6 419 aa16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Knop1Q9Z2Q2 478 aaKnown RBP16.51■□□□□ 0.23
Trim11-203ENSMUST00000108810 Scgb2b11A0A087WR49 112 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Zfp984A2A7A2 547 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Skint3A7TZF0 458 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Cyp2c69E9PXC3 491 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Brca1P48754 1812 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Cyp2c40P56657 491 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Scarf1Q5ND28 820 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tfe3Q64092 572 aaKnown RBP16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Zfp251Q6PCX8 632 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Pgrmc2Q80UU9 217 aaKnown RBP16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gjd4Q8BSD4 364 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Nemp2Q8CB65 421 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gys2Q8VCB3 704 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 FignQ9ERZ6 759 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Mrvi1Q9WUX5 899 aaKnown RBP16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gm1993A6X8I0 212 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 SlxD3Z347 212 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Lrch1P62046 709 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Erbb2P70424 1256 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gas7Q60780 421 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Secisbp2lQ6A098 1086 aaKnown RBP16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Trim47Q8C0E3 641 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Rcor2Q8C796 523 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Lpin2Q99PI5 893 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Kif17Q99PW8 1038 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Npm3Q9CPP0 175 aaKnown RBP16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tmem39aQ9CYC3 486 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Vps33aQ9D2N9 598 aa16.5■□□□□ 0.23
Trim11-203ENSMUST00000108810 Oip5A2AQ14 241 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Spocd1B1ASB6 936 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gm28042B7ZCM9 1014 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gm38392E9Q2A2 434 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Vmn2r78K7N6U5 853 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 PurbO35295 324 aaKnown RBP16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Itgb5O70309 798 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Psmb7P70195 277 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Map4k1P70218 827 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Krt86P97861 486 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Lrrn2Q6PHP6 730 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tmem132dQ76HP3 1097 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 PodnQ7TQ62 611 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Tmod2Q9JKK7 351 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fem1bQ9Z2G0 627 aa16.49■□□□□ 0.23
Trim11-203ENSMUST00000108810 Gm4907B1AXB9 411 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Flot1O08917 428 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Wdr70Q3TWF6 657 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Znf827Q505G8 1078 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fam183bQ5NC57 135 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Trak2Q6P9N8 913 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Phldb2Q8K1N2 1249 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Uap1Q91YN5 522 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Serpinb3bQ9D1Q5 387 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Hnrnph3D3Z3N4 346 aaKnown RBP16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fdxacb1Q3UY23 622 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Ccdc84Q4VA36 332 aaKnown RBP16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Cnot7Q60809 285 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Slc17a8Q8BFU8 601 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Dclk3Q8BWQ5 790 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Ccdc113Q8C5T8 377 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Med24Q99K74 987 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Myl7Q9QVP4 175 aa16.48■□□□□ 0.23
Trim11-203ENSMUST00000108810 Dhx15O35286 795 aaKnown RBP16.47■□□□□ 0.23
Trim11-203ENSMUST00000108810 Fgd3O88842 733 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 64 ms