RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W UBC8P28263 218 aa3.61□□□□□ -1.83
SWI1YPL016W AIM2P39721 246 aa3.61□□□□□ -1.83
SWI1YPL016W LCB2P40970 561 aa3.61□□□□□ -1.83
SWI1YPL016W PRM1P53835 661 aa3.61□□□□□ -1.83
SWI1YPL016W TFB3Q03290 321 aa3.61□□□□□ -1.83
SWI1YPL016W CUR1Q06469 252 aa3.61□□□□□ -1.83
SWI1YPL016W NCB2Q92317 146 aa3.61□□□□□ -1.83
SWI1YPL016W DFG16Q99234 619 aa3.61□□□□□ -1.83
SWI1YPL016W SIR3P06701 978 aa3.61□□□□□ -1.83
SWI1YPL016W DBR1P24309 405 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W STV1P37296 890 aa3.61□□□□□ -1.83
SWI1YPL016W MMS4P38257 691 aa3.61□□□□□ -1.83
SWI1YPL016W PCA1P38360 1216 aa3.61□□□□□ -1.83
SWI1YPL016W PRP24P49960 444 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W IVY1Q04934 453 aa3.61□□□□□ -1.83
SWI1YPL016W RAD34Q06665 692 aa3.61□□□□□ -1.83
SWI1YPL016W YOR283WQ12040 230 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W RDL1Q12305 139 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W RKM5Q12367 367 aa3.61□□□□□ -1.83
SWI1YPL016W LDB19Q12502 818 aa3.61□□□□□ -1.83
SWI1YPL016W RIB3Q99258 208 aa3.61□□□□□ -1.83
SWI1YPL016W CTT1P06115 562 aa3.6□□□□□ -1.83
SWI1YPL016W DBP2P24783 546 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W BET3P36149 193 aa3.6□□□□□ -1.83
SWI1YPL016W RIM2P38127 377 aa3.6□□□□□ -1.83
SWI1YPL016W RRT2P38332 387 aa3.6□□□□□ -1.83
SWI1YPL016W YMR262WP38430 313 aa3.6□□□□□ -1.83
SWI1YPL016W FMO1P38866 432 aa3.6□□□□□ -1.83
SWI1YPL016W YER158CP40095 573 aa3.6□□□□□ -1.83
SWI1YPL016W AGP3P43548 558 aa3.6□□□□□ -1.83
SWI1YPL016W ACF4P47129 309 aa3.6□□□□□ -1.83
SWI1YPL016W LSB1P53281 241 aa3.6□□□□□ -1.83
SWI1YPL016W UTP6Q02354 440 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W NOG1Q02892 647 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W YOR238WQ08634 303 aa3.6□□□□□ -1.83
SWI1YPL016W YOR214CQ12282 236 aa3.6□□□□□ -1.83
SWI1YPL016W PSY3Q12318 242 aa3.6□□□□□ -1.83
SWI1YPL016W HRR25P29295 494 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W MEI5P32489 222 aa3.6□□□□□ -1.83
SWI1YPL016W YRO2P38079 344 aa3.6□□□□□ -1.83
SWI1YPL016W YHR078WP38799 552 aa3.6□□□□□ -1.83
SWI1YPL016W YHR182WP38870 785 aa3.6□□□□□ -1.83
SWI1YPL016W LYS9P38999 446 aa3.6□□□□□ -1.83
SWI1YPL016W YMR134WP40207 237 aa3.6□□□□□ -1.83
SWI1YPL016W SOK1P40317 901 aa3.6□□□□□ -1.83
SWI1YPL016W IDP2P41939 412 aa3.6□□□□□ -1.83
SWI1YPL016W AMA1P50082 593 aa3.6□□□□□ -1.83
SWI1YPL016W KXD1P53158 218 aa3.6□□□□□ -1.83
SWI1YPL016W YGR250CP53316 781 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W RNH70P53331 553 aa3.6□□□□□ -1.83
SWI1YPL016W ARC35P53731 342 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W NMA111P53920 997 aa3.6□□□□□ -1.83
SWI1YPL016W PEX13P80667 386 aa3.6□□□□□ -1.83
SWI1YPL016W KAP120Q02932 1032 aa3.6□□□□□ -1.83
SWI1YPL016W MUS81Q04149 632 aaPredicted RBP3.6□□□□□ -1.83
SWI1YPL016W SVF1Q05515 481 aa3.6□□□□□ -1.83
SWI1YPL016W SYC1Q08553 188 aaPredicted RBP3.6□□□□□ -1.83
SWI1YPL016W TIM9O74700 87 aa3.6□□□□□ -1.83
SWI1YPL016W PUP1P25043 261 aa3.6□□□□□ -1.83
SWI1YPL016W CYS3P31373 394 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W YNK1P36010 153 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W NCL1P38205 684 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W VAB2P40003 282 aa3.6□□□□□ -1.83
SWI1YPL016W SEC24P40482 926 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W MSS2P40990 351 aa3.6□□□□□ -1.83
SWI1YPL016W PAM16P42949 149 aa3.6□□□□□ -1.83
SWI1YPL016W COS4P43542 379 aa3.6□□□□□ -1.83
SWI1YPL016W THI11P47183 340 aa3.6□□□□□ -1.83
SWI1YPL016W COS1P53822 381 aa3.6□□□□□ -1.83
SWI1YPL016W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SWI1YPL016W OYE2Q03558 400 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W YML053CQ04978 212 aa3.6□□□□□ -1.83
SWI1YPL016W CIA1Q05583 330 aa3.6□□□□□ -1.83
SWI1YPL016W ESF1Q06344 628 aaKnown RBP3.6□□□□□ -1.83
SWI1YPL016W BI3Q9ZZW7 517 aa3.6□□□□□ -1.83
SWI1YPL016W SNF1P06782 633 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W YER152CP10356 443 aa3.59□□□□□ -1.83
SWI1YPL016W RNA14P25298 677 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W YIM1P28625 365 aa3.59□□□□□ -1.83
SWI1YPL016W CDS1P38221 457 aa3.59□□□□□ -1.83
SWI1YPL016W YBR096WP38256 230 aa3.59□□□□□ -1.83
SWI1YPL016W THO1P40040 218 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W PSY2P40164 858 aa3.59□□□□□ -1.83
SWI1YPL016W AAD14P42884 376 aa3.59□□□□□ -1.83
SWI1YPL016W PMT5P52867 743 aa3.59□□□□□ -1.83
SWI1YPL016W TPK3P05986 398 aa3.59□□□□□ -1.83
SWI1YPL016W MRP1P10662 321 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W RGT1P32862 1170 aa3.59□□□□□ -1.83
SWI1YPL016W CAF4P36130 643 aa3.59□□□□□ -1.83
SWI1YPL016W SOL2P37262 315 aa3.59□□□□□ -1.83
SWI1YPL016W YBL028CP38202 106 aa3.59□□□□□ -1.83
SWI1YPL016W PCL6P40038 420 aa3.59□□□□□ -1.83
SWI1YPL016W PRE6P40303 254 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W POP1P41812 875 aa3.59□□□□□ -1.83
SWI1YPL016W RPT4P53549 437 aaKnown RBP3.59□□□□□ -1.83
SWI1YPL016W ARK1P53974 638 aa3.59□□□□□ -1.83
SWI1YPL016W BUR2Q05949 395 aa3.59□□□□□ -1.83
SWI1YPL016W EAF1Q06337 982 aa3.59□□□□□ -1.83
SWI1YPL016W SWC7Q06707 132 aa3.59□□□□□ -1.83
SWI1YPL016W ERG27Q12452 347 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 266 ms