RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	MRK1	P50873	501 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	NOG2	P53742	486 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	MTQ1	P53944	314 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	LSM3	P57743	89 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	SPP2	Q02521	185 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	PRM15	Q03262	622 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	GAS3	Q03655	524 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	VPS20	Q04272	221 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	RDR1	Q08904	546 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	YRM1	Q12340	786 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	KCS1	Q12494	1050 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	ERD1	P16151	362 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	YCK2	P23292	546 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	DBF4	P32325	704 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	DBF20	P32328	564 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	YEF1	P32622	495 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	YKL100C	P34248	587 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	PEX5	P35056	612 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	ADE17	P38009	592 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	NCL1	P38205	684 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	BZZ1	P38822	633 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	FMP52	P40008	231 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	AYR1	P40471	297 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	UTP25	P40498	721 aa	Known RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	FKH2	P41813	862 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
SKP2	YNL311C	APS3	P47064	194 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	PGU1	P47180	361 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	BOP3	P53958	396 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	KTR5	P53966	522 aa	Predicted RBP	2.7	□□□□□ -1.98
SKP2	YNL311C	MIX14	Q04341	121 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	OPY2	Q06810	360 aa		2.7	□□□□□ -1.98
SKP2	YNL311C	APN1	P22936	367 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	SSE1	P32589	693 aa	Known RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	RRP1	P35178	278 aa	Predicted RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	LRG1	P35688	1017 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	CKB2	P38930	258 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	VHR1	P40522	640 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	APQ12	P40532	138 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	GPP1	P41277	250 aa	Known RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	RPL10	P41805	221 aa	Known RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	NMD5	P46970	1048 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	SBH2	P52871	88 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	ROG1	P53118	685 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	SOK2	P53438	785 aa	Predicted RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	YLR460C	P54007	376 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	YVC1	Q12324	675 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	PRP46	Q12417	451 aa	Predicted RBP	2.69	□□□□□ -1.98
SKP2	YNL311C	RMD5	Q12508	421 aa		2.69	□□□□□ -1.98
SKP2	YNL311C	NPR1	P22211	790 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	MCX1	P38323	520 aa	Predicted RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	MTC4	P38335	694 aa	Known RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	SKN7	P38889	622 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	ALB1	P47019	175 aa	Predicted RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	ACS1	Q01574	713 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YMR111C	Q04461	462 aa	Predicted RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	YMR310C	Q04867	317 aa	Predicted RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	LDB17	Q12342	491 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	TSC13	Q99190	310 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	DDP1	Q99321	188 aa	Known RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	YHR214C-D	P0CX93	97 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	CLB2	P24869	491 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YCR099C	P25657	155 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	HES1	P35843	434 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	RRN3	P36070	627 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YKR073C	P36153	106 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	APT2	P36973	181 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YHL012W	P38709	493 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	RVS167	P39743	482 aa	Known RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	PAC11	P40960	533 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	CIN1	P40987	1014 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	SHR5	P41912	237 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YIP4	P53093	235 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	YGR066C	P53242	292 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	MNT4	P53745	580 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	DCR2	Q05924	578 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	RRP40	Q08285	240 aa	Known RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	TMA16	Q08687	178 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	FOL3	Q12676	427 aa	Predicted RBP	2.68	□□□□□ -1.98
SKP2	YNL311C	TAD3	Q9URQ3	322 aa		2.68	□□□□□ -1.98
SKP2	YNL311C	STE3	P06783	470 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	RPS21A	P0C0V8	87 aa	Known RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	AIM17	P23180	465 aa	Known RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	SPB1	P25582	841 aa	Predicted RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	IDH2	P28241	369 aa	Known RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	BEM3	P32873	1128 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	PRY2	P36110	329 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	JEM1	P40358	645 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	YIL169C	P40442	995 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	MMM1	P41800	426 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	ATG23	Q06671	453 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	CWC2	Q12046	339 aa	Predicted RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	FAP7	Q12055	197 aa	Predicted RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	PST1	Q12355	444 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	RPS31	P05759	152 aa	Known RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	SSC1	P0CS90	654 aa	Known RBP	2.67	□□□□□ -1.98
SKP2	YNL311C	ERR1	P0CX10	437 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	ERR2	P0CX11	437 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	SPO7	P18410	259 aa		2.67	□□□□□ -1.98
SKP2	YNL311C	HSP60	P19882	572 aa	Known RBP	2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms