RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YNR061CP53747 219 aa8.79□□□□□ -1
SFP1YLR403W NOP13P53883 403 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SFP1YLR403W YOR283WQ12040 230 aaKnown RBP8.79□□□□□ -1
SFP1YLR403W FAL1Q12099 399 aaKnown RBP8.79□□□□□ -1
SFP1YLR403W RBD2Q12270 262 aa8.79□□□□□ -1
SFP1YLR403W ECM3Q99252 613 aa8.79□□□□□ -1
SFP1YLR403W YRF1-2P40105 1681 aa8.79□□□□□ -1
SFP1YLR403W PHR1P05066 565 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SFP1YLR403W DST1P07273 309 aa8.79□□□□□ -1
SFP1YLR403W IMA3P0CW40 589 aa8.79□□□□□ -1
SFP1YLR403W IMA4P0CW41 589 aa8.79□□□□□ -1
SFP1YLR403W YCK1P23291 538 aa8.79□□□□□ -1
SFP1YLR403W RRP7P25368 297 aaPredicted RBP8.79□□□□□ -1
SFP1YLR403W PRP21P32524 280 aaPredicted RBP8.79□□□□□ -1
SFP1YLR403W ECT1P33412 323 aa8.79□□□□□ -1
SFP1YLR403W TOD6P34219 525 aa8.79□□□□□ -1
SFP1YLR403W CST26P38226 397 aa8.79□□□□□ -1
SFP1YLR403W ERV15P38312 142 aa8.79□□□□□ -1
SFP1YLR403W RBG1P39729 369 aa8.79□□□□□ -1
SFP1YLR403W CPR7P47103 393 aa8.79□□□□□ -1
SFP1YLR403W COS12P53053 380 aa8.79□□□□□ -1
SFP1YLR403W MRPS35P53292 345 aa8.79□□□□□ -1
SFP1YLR403W HHO1P53551 258 aa8.79□□□□□ -1
SFP1YLR403W LDB18Q07887 179 aa8.79□□□□□ -1
SFP1YLR403W RRP40Q08285 240 aaKnown RBP8.79□□□□□ -1
SFP1YLR403W IMA2Q08295 589 aa8.79□□□□□ -1
SFP1YLR403W SLF1Q12034 447 aaKnown RBP8.79□□□□□ -1
SFP1YLR403W APC9Q12107 265 aa8.79□□□□□ -1
SFP1YLR403W RHO1P06780 209 aaKnown RBP8.78□□□□□ -1
SFP1YLR403W CBS2P14905 389 aa8.78□□□□□ -1
SFP1YLR403W SAN1P22470 610 aa8.78□□□□□ -1
SFP1YLR403W YUR1P26725 428 aa8.78□□□□□ -1
SFP1YLR403W RAD14P28519 371 aa8.78□□□□□ -1
SFP1YLR403W YNK1P36010 153 aaKnown RBP8.78□□□□□ -1
SFP1YLR403W RRP4P38792 359 aaKnown RBP8.78□□□□□ -1
SFP1YLR403W YKE4P40544 346 aa8.78□□□□□ -1
SFP1YLR403W GAB1P41733 394 aa8.78□□□□□ -1
SFP1YLR403W NBP35P52920 328 aa8.78□□□□□ -1
SFP1YLR403W YGL204CP53089 101 aa8.78□□□□□ -1
SFP1YLR403W TOF2Q02208 771 aa8.78□□□□□ -1
SFP1YLR403W AIM36Q03798 255 aa8.78□□□□□ -1
SFP1YLR403W SIZ1Q04195 904 aa8.78□□□□□ -1
SFP1YLR403W MFB1Q04922 465 aa8.78□□□□□ -1
SFP1YLR403W ADY4Q05955 493 aa8.78□□□□□ -1
SFP1YLR403W YPR127WQ06494 345 aa8.78□□□□□ -1
SFP1YLR403W MFG1Q07684 458 aa8.78□□□□□ -1
SFP1YLR403W KEL3Q08979 651 aaPredicted RBP8.78□□□□□ -1
SFP1YLR403W ATP2P00830 511 aaKnown RBP8.77□□□□□ -1
SFP1YLR403W GAL4P04386 881 aa8.77□□□□□ -1
SFP1YLR403W TPK1P06244 397 aa8.77□□□□□ -1
SFP1YLR403W PRE7P23724 241 aaKnown RBP8.77□□□□□ -1
SFP1YLR403W KTR1P27810 393 aaKnown RBP8.77□□□□□ -1
SFP1YLR403W ATP11P32453 318 aa8.77□□□□□ -1
SFP1YLR403W IST2P38250 946 aa8.77□□□□□ -1
SFP1YLR403W APM2P38700 605 aa8.77□□□□□ -1
SFP1YLR403W ECM10P39987 644 aa8.77□□□□□ -1
SFP1YLR403W KRE29P40026 464 aa8.77□□□□□ -1
SFP1YLR403W YJL107CP42947 387 aa8.77□□□□□ -1
SFP1YLR403W SIP4P46954 829 aa8.77□□□□□ -1
SFP1YLR403W YNR065CP53751 1116 aa8.77□□□□□ -1
SFP1YLR403W PFA5Q03289 374 aa8.77□□□□□ -1
SFP1YLR403W GIS4Q04233 774 aa8.77□□□□□ -1
SFP1YLR403W HDA2Q06629 674 aa8.77□□□□□ -1
SFP1YLR403W SLD7Q08457 257 aa8.77□□□□□ -1
SFP1YLR403W YDL176WQ12027 708 aa8.77□□□□□ -1
SFP1YLR403W RPS9AO13516 197 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W TY1A-DR4O74302 440 aa8.77□□□□□ -1.01
SFP1YLR403W AI3P03877 415 aa8.77□□□□□ -1.01
SFP1YLR403W RPS9BP05755 195 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W ATP1P07251 545 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W TY1A-AP0CX57 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-PR1P0CX58 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-ORP0CX59 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-PR2P0CX60 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-DR5P0CX65 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-ER2P0CX66 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-GR3P0CX67 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-LR1P0CX68 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-MR2P0CX69 440 aa8.77□□□□□ -1.01
SFP1YLR403W UGA1P17649 471 aa8.77□□□□□ -1.01
SFP1YLR403W DIT2P21595 489 aa8.77□□□□□ -1.01
SFP1YLR403W DBR1P24309 405 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W EMC1P25574 760 aa8.77□□□□□ -1.01
SFP1YLR403W CYS4P32582 507 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W LST4P34239 828 aa8.77□□□□□ -1.01
SFP1YLR403W UIP3P39547 235 aa8.77□□□□□ -1.01
SFP1YLR403W SLS1P42900 643 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-JR2P47099 440 aa8.77□□□□□ -1.01
SFP1YLR403W RHO3Q00245 231 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W REG1Q00816 1014 aa8.77□□□□□ -1.01
SFP1YLR403W SKY1Q03656 742 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-DR1Q03856 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-ML1Q04706 440 aaKnown RBP8.77□□□□□ -1.01
SFP1YLR403W MRX10Q05648 414 aa8.77□□□□□ -1.01
SFP1YLR403W YLR297WQ05899 129 aa8.77□□□□□ -1.01
SFP1YLR403W MDM32Q12171 622 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-BRQ12217 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-NL2Q12470 440 aa8.77□□□□□ -1.01
SFP1YLR403W TY1A-GR2Q12485 440 aa8.77□□□□□ -1.01
SFP1YLR403W YPR014CQ6B0W2 109 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms