RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	SPT7	P35177	1332 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	RPI1	P23250	407 aa	Known RBP	5.26	□□□□□ -1.57
RSA3	YLR221C	APE2	P32454	952 aa	Known RBP	5.26	□□□□□ -1.57
RSA3	YLR221C	SWH1	P35845	1188 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	RIM2	P38127	377 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	EFM4	P40516	257 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	SAD1	P43589	448 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	YIF1	P53845	314 aa	Known RBP	5.26	□□□□□ -1.57
RSA3	YLR221C	YPL068C	Q02749	293 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	YDR387C	Q04162	555 aa		5.26	□□□□□ -1.57
RSA3	YLR221C	RRP7	P25368	297 aa	Predicted RBP	5.25	□□□□□ -1.57
RSA3	YLR221C	ECM25	P32525	599 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	PTR2	P32901	601 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	RRN10	P38204	145 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	ZTA1	P38230	334 aa	Known RBP	5.25	□□□□□ -1.57
RSA3	YLR221C	ISC1	P40015	477 aa	Known RBP	5.25	□□□□□ -1.57
RSA3	YLR221C	OCA2	P53949	197 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	RPM2	Q02773	1202 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	PNG1	Q02890	363 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	BUG1	Q12191	341 aa		5.25	□□□□□ -1.57
RSA3	YLR221C	TY1B-A	O13527	1196 aa	Known RBP	5.24	□□□□□ -1.57
RSA3	YLR221C	LPD1	P09624	499 aa	Known RBP	5.24	□□□□□ -1.57
RSA3	YLR221C	YAR066W	P0CX18	203 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	YHR214W	P0CX19	203 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	FRE2	P36033	711 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	YND1	P40009	630 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	TRS85	P46944	698 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	GWT1	P47026	490 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	SCS3	P53012	380 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	PCP1	P53259	346 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	MPS1	P54199	764 aa		5.24	□□□□□ -1.57
RSA3	YLR221C	RPL1A	P0CX43	217 aa	Known RBP	5.23	□□□□□ -1.57
RSA3	YLR221C	RPL1B	P0CX44	217 aa	Known RBP	5.23	□□□□□ -1.57
RSA3	YLR221C	MTF1	P14908	341 aa	Known RBP	5.23	□□□□□ -1.57
RSA3	YLR221C	CRM1	P30822	1084 aa	Known RBP	5.23	□□□□□ -1.57
RSA3	YLR221C	SOR1	P35497	357 aa	Known RBP	5.23	□□□□□ -1.57
RSA3	YLR221C	HEL1	P36113	551 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	EOS1	P53938	366 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	NUP53	Q03790	475 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	YLR456W	Q06199	204 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	SOR2	Q07786	357 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	REX4	Q08237	289 aa		5.23	□□□□□ -1.57
RSA3	YLR221C	CYB2	P00175	591 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	PMR1	P13586	950 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	CDC23	P16522	626 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	NDC1	P32500	655 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	ASC1	P38011	319 aa	Known RBP	5.22	□□□□□ -1.57
RSA3	YLR221C	OLA1	P38219	394 aa	Known RBP	5.22	□□□□□ -1.57
RSA3	YLR221C	YIP1	P53039	248 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	TAF12	Q03761	539 aa		5.22	□□□□□ -1.57
RSA3	YLR221C	ADE4	P04046	510 aa	Known RBP	5.21	□□□□□ -1.58
RSA3	YLR221C	PDE2	P06776	526 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	NAT1	P12945	854 aa	Known RBP	5.21	□□□□□ -1.58
RSA3	YLR221C	YCR100C	P25606	316 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	SMY1	P32364	656 aa	Known RBP	5.21	□□□□□ -1.58
RSA3	YLR221C	DPH2	P32461	534 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	YCR041W	P37265	110 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	FAD1	P38913	306 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	SHO1	P40073	367 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	PHO86	P46956	311 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	LSC1	P53598	329 aa	Known RBP	5.21	□□□□□ -1.58
RSA3	YLR221C	HCR1	Q05775	265 aa	Known RBP	5.21	□□□□□ -1.58
RSA3	YLR221C	GRS2	Q06817	618 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	SGT1	Q08446	395 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	RUP1	Q12242	671 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	SKS1	Q12505	502 aa		5.21	□□□□□ -1.58
RSA3	YLR221C	ARO3	P14843	370 aa	Known RBP	5.2	□□□□□ -1.58
RSA3	YLR221C	GDT1	P38301	280 aa	Predicted RBP	5.2	□□□□□ -1.58
RSA3	YLR221C	CAJ1	P39101	391 aa		5.2	□□□□□ -1.58
RSA3	YLR221C	ALG8	P40351	577 aa		5.2	□□□□□ -1.58
RSA3	YLR221C	YJL070C	P40361	888 aa		5.2	□□□□□ -1.58
RSA3	YLR221C	ODC1	Q03028	310 aa		5.2	□□□□□ -1.58
RSA3	YLR221C	RPN9	Q04062	393 aa	Known RBP	5.2	□□□□□ -1.58
RSA3	YLR221C	YML002W	P0CF17	737 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	SEC1	P30619	724 aa	Known RBP	5.19	□□□□□ -1.58
RSA3	YLR221C	NDI1	P32340	513 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	RIM1	P32445	135 aa	Known RBP	5.19	□□□□□ -1.58
RSA3	YLR221C	NIP1	P32497	812 aa	Known RBP	5.19	□□□□□ -1.58
RSA3	YLR221C	HAT2	P39984	401 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	RTT101	P47050	842 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	SSN8	P47821	323 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	YGR016W	P53209	190 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	PRP42	Q03776	544 aa	Known RBP	5.19	□□□□□ -1.58
RSA3	YLR221C	YLL056C	Q12177	298 aa		5.19	□□□□□ -1.58
RSA3	YLR221C	RPL6B	P05739	176 aa	Known RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	MRS3	P10566	314 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	ATR1	P13090	542 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	SPC110	P32380	944 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	LYS1	P38998	373 aa	RIP-Chip data	5.18	□□□□□ -1.58	not detected
RSA3	YLR221C	YAL037W	P39728	267 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	RHO5	P53879	331 aa	Known RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	RPL6A	Q02326	176 aa	Known RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	GIP3	Q03016	1276 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	ERP1	Q05359	219 aa	Known RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	YDR341C	Q05506	607 aa	Known RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	MUM3	Q08750	479 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	SMF3	Q12078	473 aa	Predicted RBP	5.18	□□□□□ -1.58
RSA3	YLR221C	FRE6	Q12473	712 aa		5.18	□□□□□ -1.58
RSA3	YLR221C	ARG4	P04076	463 aa	Predicted RBP	5.17	□□□□□ -1.58
RSA3	YLR221C	RPL20A	P0CX23	172 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms