RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W SPS4P09937 338 aa3.73□□□□□ -1.81
SHR3YDL212W RPL3P14126 387 aaKnown RBP3.73□□□□□ -1.81
SHR3YDL212W SEC63P14906 663 aa3.73□□□□□ -1.81
SHR3YDL212W CDC60P26637 1090 aaKnown RBP3.73□□□□□ -1.81
SHR3YDL212W TIP1P27654 210 aaPredicted RBP3.73□□□□□ -1.81
SHR3YDL212W DED81P38707 554 aaKnown RBP3.73□□□□□ -1.81
SHR3YDL212W RPA49Q01080 415 aaPredicted RBP3.73□□□□□ -1.81
SHR3YDL212W SYF1Q04048 859 aaPredicted RBP3.73□□□□□ -1.81
SHR3YDL212W YDR387CQ04162 555 aa3.73□□□□□ -1.81
SHR3YDL212W SIL1Q08199 421 aa3.73□□□□□ -1.81
SHR3YDL212W RRG7Q08774 242 aaPredicted RBP3.73□□□□□ -1.81
SHR3YDL212W YLR108CQ12259 485 aa3.73□□□□□ -1.81
SHR3YDL212W RIP1P08067 215 aa3.72□□□□□ -1.81
SHR3YDL212W ARO2P28777 376 aaKnown RBP3.72□□□□□ -1.81
SHR3YDL212W GYP6P32806 458 aa3.72□□□□□ -1.81
SHR3YDL212W PTH1P38876 190 aaKnown RBP3.72□□□□□ -1.81
SHR3YDL212W PRM5P40476 318 aa3.72□□□□□ -1.81
SHR3YDL212W WWM1P43582 211 aaKnown RBP3.72□□□□□ -1.81
SHR3YDL212W NCA3P46955 337 aa3.72□□□□□ -1.81
SHR3YDL212W HSP31Q04432 237 aa3.72□□□□□ -1.81
SHR3YDL212W PGA3Q12746 312 aaKnown RBP3.72□□□□□ -1.81
SHR3YDL212W STB6P36085 766 aa3.71□□□□□ -1.82
SHR3YDL212W RIB5P38145 238 aa3.71□□□□□ -1.82
SHR3YDL212W UTP9P38882 575 aaKnown RBP3.71□□□□□ -1.82
SHR3YDL212W SAS2P40963 338 aa3.71□□□□□ -1.82
SHR3YDL212W LAM5P43560 674 aa3.71□□□□□ -1.82
SHR3YDL212W VTC2P43585 828 aa3.71□□□□□ -1.82
SHR3YDL212W TIS11P47977 285 aa3.71□□□□□ -1.82
SHR3YDL212W DSL1P53847 754 aa3.71□□□□□ -1.82
SHR3YDL212W MRPL19P53875 158 aa3.71□□□□□ -1.82
SHR3YDL212W TAF11Q04226 346 aa3.71□□□□□ -1.82
SHR3YDL212W MHR1Q06630 226 aa3.71□□□□□ -1.82
SHR3YDL212W RBD2Q12270 262 aa3.71□□□□□ -1.82
SHR3YDL212W RPS8AP0CX39 200 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W RPS8BP0CX40 200 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W RPI1P23250 407 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W ERG3P32353 365 aa3.7□□□□□ -1.82
SHR3YDL212W APE2P32454 952 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W SPR1P32603 445 aa3.7□□□□□ -1.82
SHR3YDL212W REC114P32841 428 aa3.7□□□□□ -1.82
SHR3YDL212W SDH3P33421 198 aa3.7□□□□□ -1.82
SHR3YDL212W PIM1P36775 1133 aa3.7□□□□□ -1.82
SHR3YDL212W FAA2P39518 744 aa3.7□□□□□ -1.82
SHR3YDL212W YIF1P53845 314 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W TIM18Q08749 192 aa3.7□□□□□ -1.82
SHR3YDL212W MUM3Q08750 479 aa3.7□□□□□ -1.82
SHR3YDL212W PKH2Q12236 1081 aaKnown RBP3.7□□□□□ -1.82
SHR3YDL212W RTN2Q12443 393 aa3.7□□□□□ -1.82
SHR3YDL212W GPH1P06738 902 aaKnown RBP3.69□□□□□ -1.82
SHR3YDL212W SAS3P34218 831 aa3.69□□□□□ -1.82
SHR3YDL212W VHC1P38329 1120 aa3.69□□□□□ -1.82
SHR3YDL212W MSG5P38590 489 aa3.69□□□□□ -1.82
SHR3YDL212W RFC3P38629 340 aa3.69□□□□□ -1.82
SHR3YDL212W SDT1P53078 280 aa3.69□□□□□ -1.82
SHR3YDL212W SUB1P54000 292 aaKnown RBP3.69□□□□□ -1.82
SHR3YDL212W MDM30Q05930 598 aa3.69□□□□□ -1.82
SHR3YDL212W SPS22P25380 463 aa3.68□□□□□ -1.82
SHR3YDL212W ECM27P47144 725 aa3.68□□□□□ -1.82
SHR3YDL212W YNR048WP53740 393 aa3.68□□□□□ -1.82
SHR3YDL212W FRE4P53746 719 aa3.68□□□□□ -1.82
SHR3YDL212W GIR2Q03768 265 aaPredicted RBP3.68□□□□□ -1.82
SHR3YDL212W PPM1Q04081 328 aa3.68□□□□□ -1.82
SHR3YDL212W PAL1Q05518 499 aaKnown RBP3.68□□□□□ -1.82
SHR3YDL212W HRI1Q05905 244 aaKnown RBP3.68□□□□□ -1.82
SHR3YDL212W HIS4P00815 799 aaKnown RBP3.67□□□□□ -1.82
SHR3YDL212W TRP1P00912 224 aa3.67□□□□□ -1.82
SHR3YDL212W ILV5P06168 395 aaKnown RBP3.67□□□□□ -1.82
SHR3YDL212W PET123P17558 318 aa3.67□□□□□ -1.82
SHR3YDL212W SNT1P25357 1226 aa3.67□□□□□ -1.82
SHR3YDL212W RML2P32611 393 aa3.67□□□□□ -1.82
SHR3YDL212W OTU2P38747 307 aaKnown RBP3.67□□□□□ -1.82
SHR3YDL212W MTC6P38849 526 aa3.67□□□□□ -1.82
SHR3YDL212W PAN6P40459 309 aa3.67□□□□□ -1.82
SHR3YDL212W DLD2P46681 530 aaKnown RBP3.67□□□□□ -1.82
SHR3YDL212W SSN8P47821 323 aa3.67□□□□□ -1.82
SHR3YDL212W MTM1P53320 366 aa3.67□□□□□ -1.82
SHR3YDL212W YLR152CP54072 576 aa3.67□□□□□ -1.82
SHR3YDL212W SUP35P05453 685 aaKnown RBP3.66□□□□□ -1.82
SHR3YDL212W RED1P14291 827 aa3.66□□□□□ -1.82
SHR3YDL212W SLY1P22213 666 aa3.66□□□□□ -1.82
SHR3YDL212W GEX1P25596 615 aa3.66□□□□□ -1.82
SHR3YDL212W SIN4P32259 974 aa3.66□□□□□ -1.82
SHR3YDL212W HXT1P32465 570 aa3.66□□□□□ -1.82
SHR3YDL212W VTA1Q06263 330 aa3.66□□□□□ -1.82
SHR3YDL212W BSC6Q08280 497 aa3.66□□□□□ -1.82
SHR3YDL212W ORT1Q12375 292 aa3.66□□□□□ -1.82
SHR3YDL212W RTP1Q12751 981 aa3.66□□□□□ -1.82
SHR3YDL212W CYC3P06182 269 aa3.65□□□□□ -1.83
SHR3YDL212W NFT1P0CE68 1218 aa3.65□□□□□ -1.83
SHR3YDL212W RRT2P38332 387 aa3.65□□□□□ -1.83
SHR3YDL212W YHR054CP38780 354 aa3.65□□□□□ -1.83
SHR3YDL212W LYS1P38998 373 aaRIP-Chip data3.65□□□□□ -1.83not detected
SHR3YDL212W MNP1P53163 194 aaPredicted RBP3.65□□□□□ -1.83
SHR3YDL212W YMR181CQ03231 154 aa3.65□□□□□ -1.83
SHR3YDL212W ARX1Q03862 593 aaKnown RBP3.65□□□□□ -1.83
SHR3YDL212W SNX3Q08826 162 aaKnown RBP3.65□□□□□ -1.83
SHR3YDL212W RMD5Q12508 421 aa3.65□□□□□ -1.83
SHR3YDL212W SOD1P00445 154 aaKnown RBP3.64□□□□□ -1.83
SHR3YDL212W TEF1P02994 458 aaKnown RBP3.64□□□□□ -1.83
SHR3YDL212W SSU1P41930 458 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms