RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 FOXB2Q5VYV0 432 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 LBX2Q6XYB7 198 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 SCUBE1Q8IWY4 988 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 IFNL3Q8IZI9 196 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 MARCH10Q8NA82 808 aaPredicted RBP6.77□□□□□ -1.33
HDDC2-207ENST00000608532 ZBTB38Q8NAP3 1195 aaPredicted RBP6.77□□□□□ -1.33
HDDC2-207ENST00000608532 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
HDDC2-207ENST00000608532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDDC2-207ENST00000608532 SREK1Q8WXA9 508 aaKnown RBP6.77□□□□□ -1.33
HDDC2-207ENST00000608532 KRIT1O00522 736 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 COL6A2P12110 1019 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 GRK2P25098 689 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 GRK3P35626 688 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 GPR85P60893 370 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 KIZQ2M2Z5 673 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 SOGA3Q5TF21 947 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 STYK1Q6J9G0 422 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 MIB1Q86YT6 1006 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 FAM126BQ8IXS8 530 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 ZDHHC14Q8IZN3 488 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 TP53I13Q8NBR0 393 aaPredicted RBP6.76□□□□□ -1.33
HDDC2-207ENST00000608532 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 ARRDC4Q8NCT1 418 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 FEZF2Q8TBJ5 459 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 DNAJC7Q99615 494 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 GORASP1Q9BQQ3 440 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 MYOTQ9UBF9 498 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 ASXL2Q76L83 1435 aa6.76□□□□□ -1.33
HDDC2-207ENST00000608532 TCRBV5S2A0A599 114 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SMARCA5O60264 1052 aaPredicted RBP6.75□□□□□ -1.33
HDDC2-207ENST00000608532 GNAT1P11488 350 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 HOXA5P20719 270 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SUMO1P63165 101 aaKnown RBP6.75□□□□□ -1.33
HDDC2-207ENST00000608532 HTRA3P83110 453 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 TTLL10Q6ZVT0 673 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SAPCD2Q86UD0 394 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 KCNC2Q96PR1 638 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 ZFYVE21Q9BQ24 234 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SPATA25Q9BR10 227 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
HDDC2-207ENST00000608532 SLC27A2O14975 620 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 MAFKO60675 156 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 TADA3O75528 432 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 SOD2P04179 222 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 NKX3-2P78367 333 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 EMC4Q5J8M3 183 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 MTDHQ86UE4 582 aaKnown RBP6.74□□□□□ -1.33
HDDC2-207ENST00000608532 RBM12BQ8IXT5 1001 aaKnown RBP6.74□□□□□ -1.33
HDDC2-207ENST00000608532 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.33
HDDC2-207ENST00000608532 EXOC2Q96KP1 924 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 SMOC1Q9H4F8 434 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 IPPKQ9H8X2 491 aa6.74□□□□□ -1.33
HDDC2-207ENST00000608532 OTOL1A6NHN0 477 aaPredicted RBP6.73□□□□□ -1.33
HDDC2-207ENST00000608532 KCNC1P48547 511 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 SLURP1P55000 103 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 GRIN1Q05586 938 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 SPIRE1Q08AE8 756 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 LIPIQ6XZB0 460 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 TTLL7Q6ZT98 887 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 LRP10Q7Z4F1 713 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 TOE1Q96GM8 510 aaKnown RBP6.73□□□□□ -1.33
HDDC2-207ENST00000608532 DHRS4Q9BTZ2 278 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 C11orf84Q9BUA3 381 aaPredicted RBP6.73□□□□□ -1.33
HDDC2-207ENST00000608532 SLC6A20Q9NP91 592 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 SPATA6Q9NWH7 488 aaPredicted RBP6.73□□□□□ -1.33
HDDC2-207ENST00000608532 DTLQ9NZJ0 730 aa6.73□□□□□ -1.33
HDDC2-207ENST00000608532 FAM47E-STBD1D6RA91 191 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 AQP7O14520 342 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 CAP1Q01518 475 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 BMS1Q14692 1282 aaKnown RBP6.72□□□□□ -1.33
HDDC2-207ENST00000608532 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 OTOP3Q7RTS5 596 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 KYQ8NBH2 561 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 PTPRN2Q92932 1015 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 PCDH18Q9HCL0 1135 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 NGRNQ9NPE2 291 aaKnown RBP6.72□□□□□ -1.33
HDDC2-207ENST00000608532 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
HDDC2-207ENST00000608532 NTMQ9P121 344 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
HDDC2-207ENST00000608532 PCDHA8Q9Y5H6 950 aa6.72□□□□□ -1.33
HDDC2-207ENST00000608532 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 NKRFO15226 690 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDDC2-207ENST00000608532 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
HDDC2-207ENST00000608532 ITGA1P56199 1179 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 CTSWP56202 376 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 GUCY1A3Q02108 690 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
HDDC2-207ENST00000608532 LILRA6Q6PI73 481 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 MAMDC2Q7Z304 686 aaPredicted RBP6.71□□□□□ -1.34
HDDC2-207ENST00000608532 CARFQ8N187 725 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
HDDC2-207ENST00000608532 MKL1Q969V6 931 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms