RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 DDX41Q9UJV9 622 aaKnown RBP17.67■□□□□ 0.42
GHDC-209ENST00000588762 GNEQ9Y223 722 aaKnown RBP17.67■□□□□ 0.42
GHDC-209ENST00000588762 SYNRGQ9UMZ2 1314 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 KBTBD13C9JR72 458 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 MAFGO15525 162 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 DYNC1LI2O43237 492 aaPredicted RBP17.66■□□□□ 0.42
GHDC-209ENST00000588762 ARIH2O95376 493 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 GH1P01241 217 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 C6orf222P0C671 652 aaPredicted RBP17.66■□□□□ 0.42
GHDC-209ENST00000588762 GJA9P57773 515 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 INF2Q27J81 1249 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 GJC2Q5T442 439 aaPredicted RBP17.66■□□□□ 0.42
GHDC-209ENST00000588762 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
GHDC-209ENST00000588762 UPF3AQ9H1J1 476 aaKnown RBP17.66■□□□□ 0.42
GHDC-209ENST00000588762 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
GHDC-209ENST00000588762 MEIS1O00470 390 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 LRRC41Q15345 812 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 BRDTQ58F21 947 aaPredicted RBP17.65■□□□□ 0.42
GHDC-209ENST00000588762 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 NEK8Q86SG6 692 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 PLA2G4DQ86XP0 818 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
GHDC-209ENST00000588762 GIMAP8Q8ND71 665 aaPredicted RBP17.65■□□□□ 0.42
GHDC-209ENST00000588762 TNFRSF25Q93038 417 aa17.65■□□□□ 0.42
GHDC-209ENST00000588762 NAP1L4Q99733 375 aaKnown RBP17.65■□□□□ 0.42
GHDC-209ENST00000588762 DNM1LO00429 736 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 GGPS1O95749 300 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 CIITAP33076 1130 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 CPT1AP50416 773 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 SETQ01105 290 aaPredicted RBP17.64■□□□□ 0.41
GHDC-209ENST00000588762 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 NEDD9Q14511 834 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 LETM2Q2VYF4 491 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 GNASQ5JWF2 1037 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 CYP2W1Q8TAV3 490 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 COPS5Q92905 334 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 SENP7Q9BQF6 1050 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 MLXIPQ9HAP2 919 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
GHDC-209ENST00000588762 BRCA2P51587 3418 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 FAM86B1E9PN63 330 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 ZEB2O60315 1214 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 CAPN15O75808 1086 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 FARP2O94887 1054 aaPredicted RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 FAM86B2P0C5J1 330 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 GCFC2P16383 781 aaKnown RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 SP2Q02086 613 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 ARHGAP1Q07960 439 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 PRR16Q569H4 304 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 MOXD1Q6UVY6 613 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
GHDC-209ENST00000588762 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
GHDC-209ENST00000588762 IGLV3-22A0A075B6J6 115 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 CYP3A7-CYP3A51PA0A087WV96 503 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
GHDC-209ENST00000588762 FAM205CA6NFA0 338 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 ARP10275 920 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 PTGS1P23219 599 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 CYP3A7P24462 503 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 U2AF2P26368 475 aaKnown RBP eCLIP17.62■□□□□ 0.41
GHDC-209ENST00000588762 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
GHDC-209ENST00000588762 NKX3-2P78367 333 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 BEX3Q00994 111 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 EARS2Q5JPH6 523 aaKnown RBP17.62■□□□□ 0.41
GHDC-209ENST00000588762 SPRYD3Q8NCJ5 442 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 KLHDC9Q8NEP7 349 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 EMID1Q96A84 441 aaPredicted RBP17.62■□□□□ 0.41
GHDC-209ENST00000588762 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 TSEN34Q9BSV6 310 aaKnown RBP17.62■□□□□ 0.41
GHDC-209ENST00000588762 PKD2L1Q9P0L9 805 aa17.62■□□□□ 0.41
GHDC-209ENST00000588762 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 SORBS3O60504 671 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 CCNT1O60563 726 aaKnown RBP17.61■□□□□ 0.41
GHDC-209ENST00000588762 TDP2O95551 362 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 KCNA2P16389 499 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 KCNA10Q16322 511 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 MYSM1Q5VVJ2 828 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 PPP4R3AQ6IN85 833 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 AFG1LQ8WV93 481 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 ZNF577Q9BSK1 485 aa17.61■□□□□ 0.41
GHDC-209ENST00000588762 AGO4Q9HCK5 861 aaKnown RBP17.61■□□□□ 0.41
GHDC-209ENST00000588762 DDX25Q9UHL0 483 aaKnown RBP17.61■□□□□ 0.41
GHDC-209ENST00000588762 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
GHDC-209ENST00000588762 MOXD2PA6NHM9 499 aa17.6■□□□□ 0.41
GHDC-209ENST00000588762 A6NJR5 290 aa17.6■□□□□ 0.41
GHDC-209ENST00000588762 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
GHDC-209ENST00000588762 IPO5O00410 1097 aaKnown RBP17.6■□□□□ 0.41
GHDC-209ENST00000588762 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
GHDC-209ENST00000588762 CTAGE5O15320 804 aa17.6■□□□□ 0.41
GHDC-209ENST00000588762 EDIL3O43854 480 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms