RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 EDIL3O43854 480 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 VAV2P52735 878 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 GFPT1Q06210 699 aaPredicted RBP16.96■□□□□ 0.31
KDM4B-206ENST00000588361 NFRKBQ6P4R8 1299 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 EHBP1Q8NDI1 1231 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 CAPN7Q9Y6W3 813 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 GNGT1P63211 74 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 RASSF7Q02833 373 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 WDR93Q6P2C0 686 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 UNC13DQ70J99 1090 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 CCDC170Q8IYT3 715 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 RETREG2Q8NC44 543 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 ERGIC2Q96RQ1 377 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 SELENOOQ9BVL4 669 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 FGFBP2Q9BYJ0 223 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.31
KDM4B-206ENST00000588361 DLEC1Q9Y238 1755 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
KDM4B-206ENST00000588361 FAM170AA1A519 330 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L15C9J2P7 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L10C9JJH3 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L13C9JLJ4 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L11C9JVI0 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L18D6R9N7 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L22D6RA61 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L17D6RBQ6 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L19D6RCP7 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L20D6RJB6 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L24Q0WX57 530 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.3
KDM4B-206ENST00000588361 SERPINB2P05120 415 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 PLCG2P16885 1265 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 INPP5BP32019 993 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 SNAP25P60880 206 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 RAD54LQ92698 747 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 RIOX1Q9H6W3 641 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 DDX25Q9UHL0 483 aaKnown RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 E9PMD0 336 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 MAGEA1P43355 309 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 AARSP49588 968 aaKnown RBP eCLIP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 MMP14P50281 582 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 CACNB3P54284 484 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 RNASE9P60153 205 aaKnown RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 SHROOM1Q2M3G4 852 aaPredicted RBP16.95■□□□□ 0.3
KDM4B-206ENST00000588361 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
KDM4B-206ENST00000588361 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 TUBB4BP68371 445 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 SWT1Q5T5J6 900 aaKnown RBP16.94■□□□□ 0.3
KDM4B-206ENST00000588361 ZSCAN29Q8IWY8 852 aaPredicted RBP16.94■□□□□ 0.3
KDM4B-206ENST00000588361 RAB34Q9BZG1 259 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 SALL4Q9UJQ4 1053 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 TACC1O75410 805 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 ATP1A2P50993 1020 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CKAP4Q07065 602 aaKnown RBP16.94■□□□□ 0.3
KDM4B-206ENST00000588361 TCP10Q12799 353 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 MAN2A1Q16706 1144 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CAPS2Q9BXY5 557 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 KIAA1024Q9UPX6 916 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 GOLGA6BA6NDN3 693 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 H0YHG0 523 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CCDC172P0C7W6 258 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 PTPROQ16827 1216 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 KCTD16Q68DU8 428 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 LRRC1Q9BTT6 524 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 CD248Q9HCU0 757 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
KDM4B-206ENST00000588361 LAMB1P07942 1786 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
KDM4B-206ENST00000588361 STAT3P40763 770 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 GSCP56915 257 aaPredicted RBP16.93■□□□□ 0.3
KDM4B-206ENST00000588361 PDCLQ13371 301 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 SND1Q7KZF4 910 aaKnown RBP eCLIP16.93■□□□□ 0.3
KDM4B-206ENST00000588361 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.93■□□□□ 0.3
KDM4B-206ENST00000588361 USP21Q9UK80 565 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 RREB1Q92766 1687 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 CASZ1Q86V15 1759 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 SLC1A4P43007 532 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 VPS72Q15906 364 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
KDM4B-206ENST00000588361 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms