RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 ZKSCAN8Q15776 578 aaPredicted RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 TTI2Q6NXR4 508 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 ODF2LQ9ULJ1 636 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PCDHA12Q9UN75 941 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 OVOS2A0A0G2JMS6 1433 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 DAPK3O43293 454 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PBX1P40424 430 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PAPD7Q5XG87 772 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 ALS2CLQ60I27 953 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 OTUD6AQ7L8S5 288 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 MYMKA6NI61 221 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
RNF43-207ENST00000583753 RAD51CO43502 376 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 GCNT3O95395 438 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 NR2F2P24468 414 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 IFI16Q16666 785 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 RUFY4Q6ZNE9 571 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 GIMAP8Q8ND71 665 aaPredicted RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 CCDC26Q8TAB7 109 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 MDM1Q8TC05 714 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 DNAJC7Q99615 494 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 CELF4Q9BZC1 486 aaKnown RBP11.61□□□□□ -0.55
RNF43-207ENST00000583753 SLC24A3Q9HC58 644 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 SAMD15Q9P1V8 674 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 LRRN2O75325 713 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 PPP1R37O75864 691 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 GFPT2O94808 682 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 LDHCP07864 332 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 TBC1D1Q86TI0 1168 aaPredicted RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 ANKS4BQ8N8V4 417 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 FAM84BQ96KN1 310 aaPredicted RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 DUSP9Q99956 384 aaKnown RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 KIF4AO95239 1232 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 CCDC38Q502W7 563 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 PARP10Q53GL7 1025 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 GKAP1Q5VSY0 366 aaPredicted RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
RNF43-207ENST00000583753 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
RNF43-207ENST00000583753 MEFVO15553 781 aaPredicted RBP11.59□□□□□ -0.55
RNF43-207ENST00000583753 PRPF6O94906 941 aaKnown RBP11.59□□□□□ -0.55
RNF43-207ENST00000583753 CYP2J2P51589 502 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 KCTD1Q719H9 257 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 SHISA4Q96DD7 197 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 ARMCX3Q9UH62 379 aaPredicted RBP11.59□□□□□ -0.55
RNF43-207ENST00000583753 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 MINPP1Q9UNW1 487 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 RHOBTB3O94955 611 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
RNF43-207ENST00000583753 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 PHLDB2Q86SQ0 1253 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 SEMA6BQ9H3T3 888 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 SNX24Q9Y343 169 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 NWD1Q149M9 1564 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 LOC102724428A0A0B4J2F2 783 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 SIK1P57059 783 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 TCP10Q12799 353 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 PRR16Q569H4 304 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 CASKIN2Q8WXE0 1202 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
RNF43-207ENST00000583753 NRXN3Q9Y4C0 1643 aa11.58□□□□□ -0.55
RNF43-207ENST00000583753 RGS16O15492 202 aaPredicted RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 H2AFZP0C0S5 128 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 STAT3P40763 770 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 SNCBQ16143 134 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 ALKBH5Q6P6C2 394 aaKnown RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 H2AFVQ71UI9 128 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 SPATA20Q8TB22 786 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 ATP6V1G3Q96LB4 118 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 ELAC2Q9BQ52 826 aaKnown RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 LBHD1Q9BQE6 289 aaPredicted RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 PLA2G12BQ9BX93 195 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.56
RNF43-207ENST00000583753 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
RNF43-207ENST00000583753 DDX25Q9UHL0 483 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms