RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 PVALEFA0A1B0GWK0 134 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 PLEKHA4Q9H4M7 779 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 POC1B-GALNT4F8VUJ3 575 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 TSGA10IPQ3SY00 556 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 SRRM1Q8IYB3 904 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 ACCSQ96QU6 501 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 ABHD10Q9NUJ1 306 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 CEP72Q9P209 647 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 IQANK1A0A1B0GTG1 560 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 KRT19P08727 400 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 SPARCL1Q14515 664 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 DPP8Q6V1X1 898 aaPredicted RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 DGKHQ86XP1 1220 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 PDIK1LQ8N165 341 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 TTC25Q96NG3 672 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 TMEM60Q9H2L4 133 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 DISC1Q9NRI5 854 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 PSD3Q9NYI0 1048 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 EXOC1LA0A1B0GW35 172 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 RPSAP08865 295 aaKnown RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 ESRRAP11474 423 aaPredicted RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 ANXA13P27216 316 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 PDCD2Q16342 344 aaPredicted RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 XKR9Q5GH70 373 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 EXOC8Q8IYI6 725 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 COG1Q8WTW3 980 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 ATP6V0A1Q93050 837 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 TSC22D3Q99576 134 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 TOM1O60784 492 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 USP14P54578 494 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 RWDD2BP57060 319 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 SATB1Q01826 763 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 NAA35Q5VZE5 725 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 NRBF2Q96F24 287 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 SLITRK6Q9H5Y7 841 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 BATF3Q9NR55 127 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 GMNCA6NCL1 334 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 MOCS3O95396 460 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 ACTN1P12814 892 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 MFSD14BQ5SR56 506 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 NME8Q8N427 588 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 UHMK1Q8TAS1 419 aaKnown RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 JAG2Q9Y219 1238 aa11.62□□□□□ -0.55
SEC22B-201ENST00000578049 NOC2LQ9Y3T9 749 aaKnown RBP11.62□□□□□ -0.55
SEC22B-201ENST00000578049 NEO1Q92859 1461 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 MCF2LO15068 1137 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TNFAIP1Q13829 316 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 PDE1CQ14123 709 aaPredicted RBP11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CENPUQ71F23 418 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TADA3O75528 432 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 USH1GQ495M9 461 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CCDC124Q96CT7 223 aaKnown RBP11.61□□□□□ -0.55
SEC22B-201ENST00000578049 ADPGKQ9BRR6 497 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 SCINQ9Y6U3 715 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 ALDH1B1P30837 517 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TTC19Q6DKK2 380 aaPredicted RBP11.61□□□□□ -0.55
SEC22B-201ENST00000578049 MAEAQ7L5Y9 396 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 LARGE1O95461 756 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CA4P22748 312 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 ZMYND10O75800 440 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 KRT37O76014 449 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 TRIM55Q9BYV6 548 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 MRPL40Q9NQ50 206 aaKnown RBP11.61□□□□□ -0.55
SEC22B-201ENST00000578049 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
SEC22B-201ENST00000578049 H7C0C1 242 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 MMEP08473 750 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 ATP5OP48047 213 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 FAM102BQ5T8I3 360 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 NUGGCQ68CJ6 796 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 CCNL1Q9UK58 526 aaPredicted RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PLAAQ9Y263 795 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 SAMD9LQ8IVG5 1584 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms