RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 USP49Q70CQ1 688 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 KRT27Q7Z3Y8 459 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 ZNF570Q96NI8 536 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 PSMB7Q99436 277 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 NFU1Q9UMS0 254 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 CTNND2Q9UQB3 1225 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 TTC36A6NLP5 189 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 HMGB1P1B2RPK0 211 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 MMP1P03956 469 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 GUCY2FP51841 1108 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 PDCD2Q16342 344 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TRIM58Q8NG06 486 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 PIK3R5Q8WYR1 880 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 EHD2Q9NZN4 543 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 FBXO2Q9UK22 296 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 CORO1CQ9ULV4 474 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 XDHP47989 1333 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 CLTAP09496 248 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 CARSP49589 748 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TOB1P50616 345 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TSR1Q2NL82 804 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TBC1D25Q3MII6 688 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 C8orf74Q6P047 294 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 MAATS1Q7Z4T9 603 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 NOSTRINQ8IVI9 506 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 SLC44A5Q8NCS7 719 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 IFT81Q8WYA0 676 aa15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 LIMA1Q9UHB6 759 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-203ENST00000562609 TSPY2A6NKD2 308 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 PES1O00541 588 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CXCR5P32302 372 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 UBXN1Q04323 297 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 BYSLQ13895 437 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 TGFBRAP1Q8WUH2 860 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 LUC7L2Q9Y383 392 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 ESYT3A0FGR9 886 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 PPP1R3GB7ZBB8 358 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 DEXIO95424 95 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 PTPREP23469 700 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 TROAPQ12815 778 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 WDR59Q6PJI9 974 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 SLC30A9Q6PML9 568 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CRELD2Q6UXH1 353 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 ARFGAP2Q8N6H7 521 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CCT6BQ92526 530 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CABP5Q9NP86 173 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 TMOD1P28289 359 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 ITIH3Q06033 890 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 DPYDQ12882 1025 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 TAX1BP1Q86VP1 789 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 CD302Q8IX05 232 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 SMCR8Q8TEV9 937 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 PCDHB6Q9Y5E3 794 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
GTF3C1-203ENST00000562609 C6orf229H3BNL8 230 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 TXNRD1Q16881 649 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 EARS2Q5JPH6 523 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 DRAXINQ8NBI3 349 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 POLLQ9UGP5 575 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 DUOX1Q9NRD9 1551 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 ZSCAN5CA6NGD5 496 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 LRRC10BA6NIK2 292 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 DIAPH2O60879 1101 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 KIF4AO95239 1232 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 FESP07332 822 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 TNFRSF8P28908 595 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 ZNF804AQ7Z570 1209 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 IFT20Q8IY31 132 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 CD209Q9NNX6 404 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
GTF3C1-203ENST00000562609 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 AHCYL1O43865 530 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 RTN3O95197 1032 aaPredicted RBP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 GLI1P08151 1106 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 PKN1Q16512 942 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 GKAP1Q5VSY0 366 aaPredicted RBP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 ZNF572Q7Z3I7 529 aaPredicted RBP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 GOLGA6L10A6NI86 522 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 LINGO3P0C6S8 592 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 NEFHP12036 1026 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 TFAP4Q01664 338 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 SLMAPQ14BN4 828 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms