RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 ZCCHC17Q9NP64 241 aaKnown RBP12.74□□□□□ -0.37
SNX1-212ENST00000560861 DISC1Q9NRI5 854 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 ZNF236Q9UL36 1845 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 DNAJC25-GNG10A0A024R161 153 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 MANSC4A6NHS7 340 aaPredicted RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNX1-212ENST00000560861 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 UBA7P41226 1012 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 ERVK-24P63145 666 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 TYRO3Q06418 890 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 NT5DC1Q5TFE4 455 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
SNX1-212ENST00000560861 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 RBSNQ9H1K0 784 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 PCDHA12Q9UN75 941 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
SNX1-212ENST00000560861 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 DHX15O43143 795 aaKnown RBP12.72□□□□□ -0.37
SNX1-212ENST00000560861 RGS20O76081 388 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 NR3C2P08235 984 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 PLCG1P19174 1290 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 EDNRBP24530 442 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 ZNF76P36508 570 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 TXLNAP40222 546 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 SEMA3FQ13275 785 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 PNOCQ13519 176 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 POSTNQ15063 836 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 KANK3Q6NY19 840 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 GRAMD1CQ8IYS0 662 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 IQUBQ8NA54 791 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
SNX1-212ENST00000560861 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
SNX1-212ENST00000560861 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 INPP4AQ96PE3 977 aaPredicted RBP12.72□□□□□ -0.37
SNX1-212ENST00000560861 RAB34Q9BZG1 259 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 MROH8Q9H579 483 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 MCM3APO60318 1980 aa12.72□□□□□ -0.37
SNX1-212ENST00000560861 EML1O00423 815 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 CCDC192P0DO97 292 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 CCND2P30279 289 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 DPYDQ12882 1025 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
SNX1-212ENST00000560861 PPP2R5CQ13362 524 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 ECM1Q16610 540 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 ARHGEF16Q5VV41 709 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 NCAPG2Q86XI2 1143 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 UIMC1Q96RL1 719 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 IWS1Q96ST2 819 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 PARK7Q99497 189 aaKnown RBP12.71□□□□□ -0.37
SNX1-212ENST00000560861 RIT2Q99578 217 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 PORCNQ9H237 461 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 CUEDC2Q9H467 287 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 AGO4Q9HCK5 861 aaKnown RBP12.71□□□□□ -0.37
SNX1-212ENST00000560861 KCNH7Q9NS40 1196 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 KBTBD4Q9NVX7 518 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
SNX1-212ENST00000560861 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
SNX1-212ENST00000560861 SPATA31C1P0DKV0 1188 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 STAT6P42226 847 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 ALDH5A1P51649 535 aaPredicted RBP12.7□□□□□ -0.38
SNX1-212ENST00000560861 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 KCNK18Q7Z418 384 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 ANKRD35Q8N283 1001 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 STK17AQ9UEE5 414 aa12.7□□□□□ -0.38
SNX1-212ENST00000560861 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 A0A087WWV3 80 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 IPO5O00410 1097 aaKnown RBP12.69□□□□□ -0.38
SNX1-212ENST00000560861 MARCH6O60337 910 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 MED24O75448 989 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 768.4 ms