RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 TCF20Q9UGU0 1960 aaKnown RBP27.75■■■□□ 2.03
PBX1-217ENST00000559578 MUC3AQ02505 3323 aa27.75■■■□□ 2.03
PBX1-217ENST00000559578 NBNO60934 754 aa27.75■■■□□ 2.03
PBX1-217ENST00000559578 RGS20O76081 388 aa27.75■■■□□ 2.03
PBX1-217ENST00000559578 TFF2Q03403 129 aa27.75■■■□□ 2.03
PBX1-217ENST00000559578 CELF3Q5SZQ8 465 aaKnown RBP27.75■■■□□ 2.03
PBX1-217ENST00000559578 SPATA33Q96N06 139 aa27.75■■■□□ 2.03
PBX1-217ENST00000559578 U3KPZ7 1027 aaPredicted RBP27.75■■■□□ 2.03
PBX1-217ENST00000559578 TRANK1O15050 2925 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 ABHD14A-ACY1A0A1B0GW23 586 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 ERICH2A1L162 156 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 GCOM1H8Y6P7 765 aaPredicted RBP27.74■■■□□ 2.03
PBX1-217ENST00000559578 EFCAB14O75071 495 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 GGPS1O95749 300 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 POLR2MP0CAP2 368 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 TGFB3P10600 412 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 HOXD8P13378 290 aaPredicted RBP27.74■■■□□ 2.03
PBX1-217ENST00000559578 BMP1P13497 986 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 GRM4Q14833 912 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 RUFY2Q8WXA3 655 aa27.74■■■□□ 2.03
PBX1-217ENST00000559578 IFIT3O14879 490 aaKnown RBP27.73■■■□□ 2.03
PBX1-217ENST00000559578 CCND2P30279 289 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 DEFB103AP81534 67 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 IKBKEQ14164 716 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 HSDL1Q3SXM5 330 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 KRT40Q6A162 431 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 PIGSQ96S52 555 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 RIOX1Q9H6W3 641 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 COG5Q9UP83 839 aa27.73■■■□□ 2.03
PBX1-217ENST00000559578 BAZ2BQ9UIF8 2168 aaKnown RBP27.72■■■□□ 2.03
PBX1-217ENST00000559578 SORBS3O60504 671 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 GRB10Q13322 594 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 ZNF618Q5T7W0 954 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 TTC22Q5TAA0 569 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 TMCO2Q7Z6W1 182 aaPredicted RBP27.72■■■□□ 2.03
PBX1-217ENST00000559578 RALYLQ86SE5 291 aaKnown RBP27.72■■■□□ 2.03
PBX1-217ENST00000559578 FCHSD1Q86WN1 690 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 MLXIPQ9HAP2 919 aa27.72■■■□□ 2.03
PBX1-217ENST00000559578 LCHNA4D1U4 455 aa27.71■■■□□ 2.03
PBX1-217ENST00000559578 GJB5O95377 273 aa27.71■■■□□ 2.03
PBX1-217ENST00000559578 GSPT1P15170 499 aaKnown RBP27.71■■■□□ 2.03
PBX1-217ENST00000559578 UBA1P22314 1058 aaKnown RBP27.71■■■□□ 2.03
PBX1-217ENST00000559578 ZNF200P98182 395 aaPredicted RBP27.71■■■□□ 2.03
PBX1-217ENST00000559578 SART3Q15020 963 aaKnown RBP27.71■■■□□ 2.03
PBX1-217ENST00000559578 TRIM71Q2Q1W2 868 aaKnown RBP27.71■■■□□ 2.03
PBX1-217ENST00000559578 IL31RAQ8NI17 732 aa27.71■■■□□ 2.03
PBX1-217ENST00000559578 RAD9AQ99638 391 aa27.71■■■□□ 2.03
PBX1-217ENST00000559578 PNMA6FA0A0J9YX94 578 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 CYP21A2P08686 494 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 COL9A1P20849 921 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 KCNQ1P51787 676 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 SP2Q02086 613 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 WTAPQ15007 396 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 BDP1A6H8Y1 2624 aa27.7■■■□□ 2.02
PBX1-217ENST00000559578 EMSYQ7Z589 1322 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 SLC35G1Q2M3R5 365 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 TRAF7Q6Q0C0 670 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 SPRED2Q7Z698 418 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 NCOA7Q8NI08 942 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 WNT8BQ93098 351 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 ZFP91Q96JP5 570 aaPredicted RBP27.69■■■□□ 2.02
PBX1-217ENST00000559578 NECAB3Q96P71 396 aaPredicted RBP27.69■■■□□ 2.02
PBX1-217ENST00000559578 C16orf70Q9BSU1 422 aa27.69■■■□□ 2.02
PBX1-217ENST00000559578 CYTH3O43739 400 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 LPXNO60711 386 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 LGR5O75473 907 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 PDE4AP27815 886 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 TCTN1Q2MV58 587 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 GNPTABQ3T906 1256 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 HLA-CQ95604 372 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 LMCD1Q9NZU5 365 aa27.68■■■□□ 2.02
PBX1-217ENST00000559578 COL4A4P53420 1690 aaPredicted RBP27.68■■■□□ 2.02
PBX1-217ENST00000559578 H3BRB1 525 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 THPOP40225 353 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 PTH1RQ03431 593 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 TROAPQ12815 778 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 HIC1Q14526 733 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 CATIPQ7Z7H3 387 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 SERINC5Q86VE9 423 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 GPKOWQ92917 476 aaPredicted RBP eCLIP27.67■■■□□ 2.02
PBX1-217ENST00000559578 TUT1Q9H6E5 874 aaKnown RBP27.67■■■□□ 2.02
PBX1-217ENST00000559578 SENP2Q9HC62 589 aa27.67■■■□□ 2.02
PBX1-217ENST00000559578 REV3LO60673 3130 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 C17orf102A2RUQ5 167 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 RSPH10B2B2RC85 870 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 E7EWF7 191 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 NOP56O00567 594 aaKnown RBP27.66■■■□□ 2.02
PBX1-217ENST00000559578 STAM2O75886 525 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 RSPH10BP0C881 870 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 CHMLP26374 656 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 MBTPS1Q14703 1052 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 GDPD5Q8WTR4 605 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 ATP6V0A1Q93050 837 aa27.66■■■□□ 2.02
PBX1-217ENST00000559578 TGS1Q96RS0 853 aaKnown RBP27.66■■■□□ 2.02
PBX1-217ENST00000559578 LGALS2P05162 132 aa27.65■■■□□ 2.02
PBX1-217ENST00000559578 FAM117BQ6P1L5 589 aa27.65■■■□□ 2.02
PBX1-217ENST00000559578 USP26Q9BXU7 913 aa27.65■■■□□ 2.02
PBX1-217ENST00000559578 MTUS1Q9ULD2 1270 aa27.65■■■□□ 2.02
PBX1-217ENST00000559578 LINC01553A4QN01 128 aa27.64■■■□□ 2.02
PBX1-217ENST00000559578 AMHP03971 560 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms