RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TBC1D8O95759 1140 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 NFKB2Q00653 900 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 GALNT18Q6P9A2 607 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 DDX53Q86TM3 631 aaKnown RBP6.11□□□□□ -1.43
CASC4-206ENST00000558847 MTDHQ86UE4 582 aaKnown RBP6.11□□□□□ -1.43
CASC4-206ENST00000558847 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 FRS2Q8WU20 508 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 MMP19Q99542 508 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
CASC4-206ENST00000558847 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
CASC4-206ENST00000558847 NPHP3-ACAD11A0A0J9YXS1 232 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 GSTA4O15217 222 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 RAB11FIP3O75154 756 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 MSL3P1P0C860 447 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 PNLIPP16233 465 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 SDSP20132 328 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 NEK4P51957 841 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 GTF2A2P52657 109 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 GUCY1A3Q02108 690 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 DHCR24Q15392 516 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 KIZQ2M2Z5 673 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 HLA-DQA1Q5Y7H0 255 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 MBLAC2Q68D91 279 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 KIF18BQ86Y91 864 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 PHF20Q9BVI0 1012 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 TNFRSF12AQ9NP84 129 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 SIRT5Q9NXA8 310 aa6.1□□□□□ -1.43
CASC4-206ENST00000558847 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
CASC4-206ENST00000558847 TCRBV16S1A1N1A0A5B0 115 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 BLACEA4D250 179 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 BRINP1O60477 761 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 PLS3P13797 630 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 PRKCAP17252 672 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 CORO7P57737 925 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 ERVFRD-1P60508 538 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.43
CASC4-206ENST00000558847 MVKQ03426 396 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 CFAP100Q494V2 611 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 TMEM151BQ8IW70 566 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 NUP43Q8NFH3 380 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 HOMER2Q9NSB8 354 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 CLEC1BQ9P126 229 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 FBLN5Q9UBX5 448 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 TNPO3Q9Y5L0 923 aaKnown RBP6.09□□□□□ -1.43
CASC4-206ENST00000558847 IRAK3Q9Y616 596 aa6.09□□□□□ -1.43
CASC4-206ENST00000558847 ARVCFO00192 962 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 CRTAMO95727 393 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 PI3P19957 117 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 PAK1Q13153 545 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 LAPTM5Q13571 262 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 SSPNQ14714 243 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 FAM47CQ5HY64 1035 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 ZCCHC8Q6NZY4 707 aaKnown RBP6.08□□□□□ -1.44
CASC4-206ENST00000558847 LBX2Q6XYB7 198 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 FGD2Q7Z6J4 655 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 FERMT3Q86UX7 667 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 JAMLQ86YT9 394 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 CCDC103Q8IW40 242 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 RPUSD2Q8IZ73 545 aaKnown RBP6.08□□□□□ -1.44
CASC4-206ENST00000558847 AFAP1L2Q8N4X5 818 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 ATL2Q8NHH9 583 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 ORAI3Q9BRQ5 295 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 GPRC5CQ9NQ84 441 aa6.08□□□□□ -1.44
CASC4-206ENST00000558847 ARNTLO00327 626 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 NPHS1O60500 1241 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 S100BP04271 92 aaPredicted RBP6.07□□□□□ -1.44
CASC4-206ENST00000558847 JMJD7P0C870 316 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 SART3Q15020 963 aaKnown RBP6.07□□□□□ -1.44
CASC4-206ENST00000558847 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 DENND5AQ6IQ26 1287 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 CPNE8Q86YQ8 564 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 ZC3H7AQ8IWR0 971 aaKnown RBP6.07□□□□□ -1.44
CASC4-206ENST00000558847 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
CASC4-206ENST00000558847 NLGN2Q8NFZ4 835 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
CASC4-206ENST00000558847 SCLYQ96I15 445 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 SIGLEC10Q96LC7 697 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 TRAF6Q9Y4K3 522 aa6.07□□□□□ -1.44
CASC4-206ENST00000558847 FAM47E-STBD1D6RA91 191 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 WNT9AO14904 365 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 ZEB2O60315 1214 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 SASH1O94885 1247 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 RASGRP1O95267 797 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 SDHBP21912 280 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 SCNN1BP51168 640 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 EXOSC10Q01780 885 aaKnown RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 NFIXQ14938 502 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 INF2Q27J81 1249 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 CDCA2Q69YH5 1023 aaPredicted RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 KCNT2Q6UVM3 1135 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 NECAB2Q7Z6G3 386 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
CASC4-206ENST00000558847 MARCH10Q8NA82 808 aaPredicted RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 USP7Q93009 1102 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms