RNA–Protein interactions for RNA: ENST00000550047.5

SLC8B1-210, Transcript of solute carrier family 8 member B1, humanhuman

TSL 2 BASIC

Gene SLC8B1, Length 2,493 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-210ENST00000550047 BLOC1S4Q9NUP1 217 aa18.75■□□□□ 0.59
SLC8B1-210ENST00000550047 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 PRDX5P30044 214 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 NAPAP54920 295 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 HDLBPQ00341 1268 aaKnown RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 CDC37Q16543 378 aaPredicted RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 MEI1Q5TIA1 1274 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 INPP4AQ96PE3 977 aaPredicted RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 PLAAQ9Y263 795 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 TLR2O60603 784 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 SERPING1P05155 500 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 KLRC1P26715 233 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 MAP2K2P36507 400 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 DDR1Q08345 913 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 GRB10Q13322 594 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 CEP85LQ5SZL2 805 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 RNF187Q5TA31 235 aaPredicted RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 SFMBT2Q5VUG0 894 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 MAATS1Q7Z4T9 603 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 LUC7LQ9NQ29 371 aaKnown RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 CEP72Q9P209 647 aa18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 PACSIN2Q9UNF0 486 aaPredicted RBP18.74■□□□□ 0.59
SLC8B1-210ENST00000550047 FAM107AO95990 144 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 RNASE9P60153 205 aaKnown RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 DYNLL2Q96FJ2 89 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 PCDHGC5Q9Y5F6 944 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 PALM3A6NDB9 673 aaPredicted RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 RAD51CO43502 376 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 GOLGA8HP0CJ92 632 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 KLRK1P26718 216 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 HSPA9P38646 679 aaKnown RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 TXKP42681 527 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 EHHADHQ08426 723 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 LARP4BQ92615 738 aaKnown RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 SYN2Q92777 582 aaPredicted RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 NUCKS1Q9H1E3 243 aaKnown RBP18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 STK17AQ9UEE5 414 aa18.73■□□□□ 0.59
SLC8B1-210ENST00000550047 SMCO2A6NFE2 343 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 E7EVH7 732 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 NOL4O94818 638 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 CRKLP46109 303 aaKnown RBP18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 FAM83BQ5T0W9 1011 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 VCPKMTQ9H867 229 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 GGA2Q9UJY4 613 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 SRRM3A6NNA2 597 aaPredicted RBP18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TSPY3P0CV98 308 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TSPY8P0CW00 308 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 HPDP32754 393 aaPredicted RBP18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TNNC1P63316 161 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 ACTN3Q08043 901 aaPredicted RBP18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 IFT88Q13099 833 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 USP38Q8NB14 1042 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TBCKQ8TEA7 893 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 PNMA5Q96PV4 448 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TSG101Q99816 390 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 CPVLQ9H3G5 476 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 TMBIM4Q9HC24 238 aa18.72■□□□□ 0.59
SLC8B1-210ENST00000550047 GOLGA6L10A6NI86 522 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 MYBP10242 640 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 LRRC41Q15345 812 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 KLHL7Q8IXQ5 586 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 GLIS3Q8NEA6 775 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 TBC1D5Q92609 795 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 C6orf50Q9HD87 102 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 PLCB1Q9NQ66 1216 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 CCDC88AQ3V6T2 1871 aa18.71■□□□□ 0.59
SLC8B1-210ENST00000550047 KLRF2D3W0D1 207 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 GNA11P29992 359 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 SLC18A3Q16572 532 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 CDK5RAP3Q96JB5 506 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 TMEM47Q9BQJ4 181 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 LZTS2Q9BRK4 669 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 CXorf56Q9H5V9 222 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 RIC8AQ9NPQ8 531 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 STX8Q9UNK0 236 aa18.71■□□□□ 0.58
SLC8B1-210ENST00000550047 POLR2FP61218 127 aaKnown RBP18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 CCDC13Q8IYE1 715 aa18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 ARFGAP2Q8N6H7 521 aa18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 ISCUQ9H1K1 167 aa18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 CENPHQ9H3R5 247 aa18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 PPANQ9NQ55 473 aaKnown RBP18.7■□□□□ 0.58
SLC8B1-210ENST00000550047 TMEM59LQ9UK28 342 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms