RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ZNF365Q70YC5 407 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 HEATR3Q7Z4Q2 680 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 SESTD1Q86VW0 696 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 FBXL16Q8N461 479 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 SPATA33Q96N06 139 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 RTEL1Q9NZ71 1219 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 GOLGA8AA7E2F4 631 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 GOLGA8BA8MQT2 603 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 SPATA31C2B4DYI2 1134 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 CDC27P30260 824 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 CHMP4BP1P59074 171 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 FGD1P98174 961 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 RASIP1Q5U651 963 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 MLXIPQ9HAP2 919 aa26.5■■□□□ 1.83
CLDND1-230ENST00000514537 V9GY48 417 aaPredicted RBP26.5■■□□□ 1.83
CLDND1-230ENST00000514537 SORBS3O60504 671 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 F2P00734 622 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 SEMA3FQ13275 785 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 WWC2Q6AWC2 1192 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 KATNAL1Q9BW62 490 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 BCAS3Q9H6U6 928 aa26.49■■□□□ 1.83
CLDND1-230ENST00000514537 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.48■■□□□ 1.83
CLDND1-230ENST00000514537 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.48■■□□□ 1.83
CLDND1-230ENST00000514537 HAS3O00219 553 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 FIBPO43427 364 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 RPS6KB1P23443 525 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 PSMA5P28066 241 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 PSEN2P49810 448 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 APOBRQ0VD83 1088 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 UBE2SQ16763 222 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 BRF1Q92994 677 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 VWCEQ96DN2 955 aa26.48■■□□□ 1.83
CLDND1-230ENST00000514537 FGBP02675 491 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 ZNF286BP0CG31 522 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 NEDD9Q14511 834 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 MFSD10Q14728 455 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 PTGISQ16647 500 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 GDF6Q6KF10 455 aaPredicted RBP26.47■■□□□ 1.83
CLDND1-230ENST00000514537 TYW1BQ6NUM6 668 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 RPUSD2Q8IZ73 545 aaKnown RBP26.47■■□□□ 1.83
CLDND1-230ENST00000514537 HERVK_113Q902F9 699 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 SCLYQ96I15 445 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 CTAGE1Q96RT6 745 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 AGXT2Q9BYV1 514 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 GTF2IRD1Q9UHL9 959 aa26.47■■□□□ 1.83
CLDND1-230ENST00000514537 NAP1L2Q9ULW6 460 aaPredicted RBP26.47■■□□□ 1.83
CLDND1-230ENST00000514537 COL6A3P12111 3177 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 PITPNM1O00562 1244 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 ADD1P35611 737 aaKnown RBP26.46■■□□□ 1.83
CLDND1-230ENST00000514537 METAP2P50579 478 aaKnown RBP eCLIP26.46■■□□□ 1.83
CLDND1-230ENST00000514537 KIAA0753Q2KHM9 967 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 ZNF697Q5TEC3 545 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 METTL7BQ6UX53 244 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 NLRX1Q86UT6 975 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 TEX2Q8IWB9 1127 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 SENP7Q9BQF6 1050 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 ALG1Q9BT22 464 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 USP26Q9BXU7 913 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 HDAC6Q9UBN7 1215 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 PCDHA6Q9UN73 950 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 NOD1Q9Y239 953 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 PCDHA8Q9Y5H6 950 aa26.46■■□□□ 1.83
CLDND1-230ENST00000514537 CCDC196A0A1B0GTZ2 297 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 SPDYE3A6NKU9 549 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 hCG_1984214I3L0E3 225 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 NAPAP54920 295 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 BFSP2Q13515 415 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 PPP1R18Q6NYC8 613 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 ZNF713Q8N859 430 aaPredicted RBP26.45■■□□□ 1.82
CLDND1-230ENST00000514537 C7orf31Q8N865 590 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 C16orf70Q9BSU1 422 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 RIC8AQ9NPQ8 531 aa26.45■■□□□ 1.82
CLDND1-230ENST00000514537 STXBP3O00186 592 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 CYFIP1Q7L576 1253 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 RETREG2Q8NC44 543 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 GUCD1Q96NT3 240 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 SEMA6BQ9H3T3 888 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 BARHL2Q9NY43 387 aa26.44■■□□□ 1.82
CLDND1-230ENST00000514537 ITGB5P18084 799 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 GPRASP2Q96D09 838 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 FAM161BQ96MY7 647 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 ZSWIM6Q9HCJ5 1215 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 CXXC1Q9P0U4 656 aaPredicted RBP26.43■■□□□ 1.82
CLDND1-230ENST00000514537 STXBP5LQ9Y2K9 1186 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 UBIAD1Q9Y5Z9 338 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 NID2Q14112 1375 aa26.43■■□□□ 1.82
CLDND1-230ENST00000514537 NOP56O00567 594 aaKnown RBP26.42■■□□□ 1.82
CLDND1-230ENST00000514537 PFKMP08237 780 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 IQCF3P0C7M6 154 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 EVCP57679 992 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 OTOP2Q7RTS6 562 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 CAGE1Q8TC20 777 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 CDHR1Q96JP9 859 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 GPR20Q99678 358 aa26.42■■□□□ 1.82
CLDND1-230ENST00000514537 MTIF3Q9H2K0 278 aaKnown RBP26.42■■□□□ 1.82
CLDND1-230ENST00000514537 SMCO2A6NFE2 343 aa26.41■■□□□ 1.82
CLDND1-230ENST00000514537 LGALS2P05162 132 aa26.41■■□□□ 1.82
CLDND1-230ENST00000514537 RFC2P35250 354 aa26.41■■□□□ 1.82
CLDND1-230ENST00000514537 ADCY7P51828 1080 aa26.41■■□□□ 1.82
CLDND1-230ENST00000514537 PFKFB3Q16875 520 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms