RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZC3H18Q86VM9 953 aaKnown RBP7.05□□□□□ -1.28
SMC4-219ENST00000487747 CCDC140Q96MF4 163 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 ZSWIM3Q96MP5 696 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 TINF2Q9BSI4 451 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 CLDND1Q9NY35 253 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 INVSQ9Y283 1065 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 TCRBV5S2A0A599 114 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 HGSO14964 777 aaPredicted RBP7.04□□□□□ -1.28
SMC4-219ENST00000487747 MSCO60682 206 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 TADA3O75528 432 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 GTF2A2P52657 109 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 PPP2R2AP63151 447 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 STEAP3Q658P3 488 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 TTLL6Q8N841 843 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.286e-8■■■■□ 23.9
SMC4-219ENST00000487747 HNRNPLLQ8WVV9 542 aaKnown RBP7.04□□□□□ -1.28
SMC4-219ENST00000487747 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 RBPJLQ9UBG7 517 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 PPARGC1AQ9UBK2 798 aaKnown RBP7.04□□□□□ -1.28
SMC4-219ENST00000487747 ZNF652Q9Y2D9 606 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 COA3Q9Y2R0 106 aaPredicted RBP7.04□□□□□ -1.28
SMC4-219ENST00000487747 NPFFR2Q9Y5X5 522 aa7.04□□□□□ -1.28
SMC4-219ENST00000487747 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 H7BY64 318 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 TCF3P15923 654 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 MAGEA10P43363 369 aaPredicted RBP7.03□□□□□ -1.28
SMC4-219ENST00000487747 ZXDCQ2QGD7 858 aaPredicted RBP7.03□□□□□ -1.28
SMC4-219ENST00000487747 FAM26FQ5R3K3 315 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 YIPF4Q9BSR8 244 aa7.03□□□□□ -1.28
SMC4-219ENST00000487747 CNOT11Q9UKZ1 510 aaKnown RBP7.03□□□□□ -1.28
SMC4-219ENST00000487747 LRG1P02750 347 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 MLLT6P55198 1093 aaPredicted RBP7.02□□□□□ -1.29
SMC4-219ENST00000487747 NKX3-2P78367 333 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 PUM1Q14671 1186 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMC4-219ENST00000487747 TEPPQ6URK8 271 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 EEPD1Q7L9B9 569 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
SMC4-219ENST00000487747 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 SSBP3Q9BWW4 388 aaPredicted RBP7.02□□□□□ -1.29
SMC4-219ENST00000487747 JAM3Q9BX67 310 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 SMPD4Q9NXE4 827 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 DTLQ9NZJ0 730 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 PCDHB4Q9Y5E5 795 aa7.02□□□□□ -1.29
SMC4-219ENST00000487747 DLX3O60479 287 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 PLATP00750 562 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 ZNF28P17035 718 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 ADAM17P78536 824 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 RBM10P98175 930 aaKnown RBP7.01□□□□□ -1.29
SMC4-219ENST00000487747 ZNF827Q17R98 1081 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 EMC4Q5J8M3 183 aa7.01□□□□□ -1.29
SMC4-219ENST00000487747 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
SMC4-219ENST00000487747 B4GALT3O60512 393 aa7□□□□□ -1.29
SMC4-219ENST00000487747 DNAJA1P31689 397 aaKnown RBP7□□□□□ -1.29
SMC4-219ENST00000487747 ARID5AQ03989 594 aa7□□□□□ -1.29
SMC4-219ENST00000487747 KIAA2012Q0VF49 1180 aa7□□□□□ -1.29
SMC4-219ENST00000487747 PRAMEF18Q5VWM3 479 aa7□□□□□ -1.29
SMC4-219ENST00000487747 LIMS2Q7Z4I7 341 aa7□□□□□ -1.29
SMC4-219ENST00000487747 GPR20Q99678 358 aa7□□□□□ -1.29
SMC4-219ENST00000487747 DGKIO75912 1065 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 IL13P35225 146 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 MAP4K2Q12851 820 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 GNL2Q13823 731 aaKnown RBP6.99□□□□□ -1.29
SMC4-219ENST00000487747 PHF19Q5T6S3 580 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 TMC5Q6UXY8 1006 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 LGI4Q8N135 537 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 MBD6Q96DN6 1003 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 LCORQ96JN0 433 aaPredicted RBP6.99□□□□□ -1.29
SMC4-219ENST00000487747 C8orf49Q96NF6 230 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 EPB41L1Q9H4G0 881 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 NGRNQ9NPE2 291 aaKnown RBP6.99□□□□□ -1.29
SMC4-219ENST00000487747 MYOTQ9UBF9 498 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 CROTQ9UKG9 612 aa6.99□□□□□ -1.29
SMC4-219ENST00000487747 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 KCNT2Q6UVM3 1135 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 ANKS3Q6ZW76 656 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 USP53Q70EK8 1073 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 PROSER1Q86XN7 944 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 CLEC4DQ8WXI8 215 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 ZCCHC14Q8WYQ9 949 aaKnown RBP6.98□□□□□ -1.29
SMC4-219ENST00000487747 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 LOXL4Q96JB6 756 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
SMC4-219ENST00000487747 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 EPN3Q9H201 632 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 ASH2LQ9UBL3 628 aa6.98□□□□□ -1.29
SMC4-219ENST00000487747 SLC27A2O14975 620 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 KLF4O43474 513 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 GRIN1Q05586 938 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 NTRK3Q16288 839 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 DDR2Q16832 855 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 SMOC1Q9H4F8 434 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 GPR27Q9NS67 375 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 ZNF536O15090 1300 aa6.97□□□□□ -1.29
SMC4-219ENST00000487747 BLACEA4D250 179 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 AGRPO00253 132 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms