RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 ZNF143P52747 638 aaPredicted RBP3.92□□□□□ -1.78
CACUL1-202ENST00000477583 RASGRF1Q13972 1273 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 SLC10A6Q3KNW5 377 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 SV2CQ496J9 727 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 MIB1Q86YT6 1006 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 ARHGEF39Q8N4T4 335 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 FAM26EQ8N5C1 309 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 TTLL6Q8N841 843 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 TXNDC5Q8NBS9 432 aaKnown RBP3.92□□□□□ -1.78
CACUL1-202ENST00000477583 PLEKHO2Q8TD55 490 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 DVL3Q92997 716 aaPredicted RBP3.92□□□□□ -1.78
CACUL1-202ENST00000477583 PPP1R14AQ96A00 147 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 SRPK1Q96SB4 655 aaKnown RBP3.92□□□□□ -1.78
CACUL1-202ENST00000477583 LGR4Q9BXB1 951 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 PIF1Q9H611 641 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 ST6GALNAC2Q9UJ37 374 aa3.92□□□□□ -1.78
CACUL1-202ENST00000477583 CDK11AQ9UQ88 783 aaPredicted RBP3.92□□□□□ -1.78
CACUL1-202ENST00000477583 TACR2P21452 398 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 ITGA1P56199 1179 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 NFE2L2Q16236 605 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 SPATC1Q76KD6 591 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 LRP10Q7Z4F1 713 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 PLEKHH3Q7Z736 793 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 STK32CQ86UX6 486 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 ST13P5Q8NFI4 369 aaPredicted RBP3.91□□□□□ -1.78
CACUL1-202ENST00000477583 SEC14L1Q92503 715 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 LCORQ96JN0 433 aaPredicted RBP3.91□□□□□ -1.78
CACUL1-202ENST00000477583 SORCS2Q96PQ0 1159 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 MMP19Q99542 508 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 SSBP3Q9BWW4 388 aaPredicted RBP3.91□□□□□ -1.78
CACUL1-202ENST00000477583 BTG4Q9NY30 223 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 EMC9Q9Y3B6 208 aa3.91□□□□□ -1.78
CACUL1-202ENST00000477583 DDX3XO00571 662 aaKnown RBP eCLIP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SGSM2O43147 1006 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 TBX1O43435 398 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 LAMTOR5O43504 91 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 DIAPH1O60610 1272 aaKnown RBP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 ITGAVP06756 1048 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 THBDP07204 575 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 PLS3P13797 630 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 GDF5P43026 501 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SLC6A11P48066 632 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SCRN1Q12765 414 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 MTERF2Q49AM1 385 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 PRAMEF18Q5VWM3 479 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 MBLAC2Q68D91 279 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 LIMS2Q7Z4I7 341 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SPRED1Q7Z699 444 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 TEX2Q8IWB9 1127 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 FAM126BQ8IXS8 530 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 CRACR2BQ8N4Y2 399 aaPredicted RBP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 BVESQ8NE79 360 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SH3RF3Q8TEJ3 882 aaPredicted RBP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 COPS5Q92905 334 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 KISS1RQ969F8 398 aaPredicted RBP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 MRFAP1L1Q96HT8 127 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 DNAJC7Q99615 494 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 YIPF4Q9BSR8 244 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 SCAND2PQ9GZW5 306 aaPredicted RBP3.9□□□□□ -1.79
CACUL1-202ENST00000477583 EPN3Q9H201 632 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 LRP2BPQ9P2M1 347 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 PFDN2Q9UHV9 154 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 AKT3Q9Y243 479 aa3.9□□□□□ -1.79
CACUL1-202ENST00000477583 A0A1W2PQU0 124 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 C9orf118A6NHY6 69 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 C22orf46C9J442 243 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 NOP56O00567 594 aaKnown RBP3.89□□□□□ -1.79
CACUL1-202ENST00000477583 KCNH1O95259 989 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 HMGA2P52926 109 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 SSRP1Q08945 709 aaKnown RBP3.89□□□□□ -1.79
CACUL1-202ENST00000477583 IFRD2Q12894 506 aaPredicted RBP3.89□□□□□ -1.79
CACUL1-202ENST00000477583 SURF1Q15526 300 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 PRR31Q5SQ13 230 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 POMZP3Q6PJE2 187 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 MILR1Q7Z6M3 343 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 ZNF227Q86WZ6 799 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 TRIM59Q8IWR1 403 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 DPF3Q92784 378 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 ZNF669Q96BR6 464 aaPredicted RBP3.89□□□□□ -1.79
CACUL1-202ENST00000477583 MRGPRX3Q96LB0 322 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 NGRNQ9NPE2 291 aaKnown RBP3.89□□□□□ -1.79
CACUL1-202ENST00000477583 GPRC5CQ9NQ84 441 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 TSC22D4Q9Y3Q8 395 aa3.89□□□□□ -1.79
CACUL1-202ENST00000477583 AGRPO00253 132 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 B4GALT3O60512 393 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 CYP1A1P04798 512 aaPredicted RBP3.88□□□□□ -1.79
CACUL1-202ENST00000477583 ZNF28P17035 718 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 FPR2P25090 351 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 STAT5AP42229 794 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 GRIA2P42262 883 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 ADAM9Q13443 819 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 MROH9Q5TGP6 573 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 GTF2IRD2BQ6EKJ0 949 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 GTF2IRD2Q86UP8 949 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 LILRB2Q8N423 598 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 BTN2A2Q8WVV5 523 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 SGSM3Q96HU1 749 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 ZSWIM3Q96MP5 696 aa3.88□□□□□ -1.79
CACUL1-202ENST00000477583 CDK5RAP1Q96SZ6 601 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms