RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ORC4O43929 436 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 NMT2O60551 498 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 PLA2G6O60733 806 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 MCCP23508 829 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 SLC1A4P43007 532 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 NOVP48745 357 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 ALX1Q15699 326 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 Q7L0L9 218 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 FAM160B2Q86V87 743 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 TICAM2Q86XR7 235 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 ANKRD35Q8N283 1001 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 DEFB123Q8N688 67 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 KLHDC9Q8NEP7 349 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 CHURC1Q8WUH1 139 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 STAG1Q8WVM7 1258 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 KAT6AQ92794 2004 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 FAM227BQ96M60 508 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 PRDM5Q9NQX1 630 aaPredicted RBP8.33□□□□□ -1.08
SND1-205ENST00000467238 HELLSQ9NRZ9 838 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 FBXO40Q9UH90 709 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 ZHX1Q9UKY1 873 aaPredicted RBP8.33□□□□□ -1.08
SND1-205ENST00000467238 MAP4K5Q9Y4K4 846 aa8.33□□□□□ -1.08
SND1-205ENST00000467238 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
SND1-205ENST00000467238 SCN5AQ14524 2016 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ZMYM6O95789 1325 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ADCY6O43306 1168 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 RANBP6O60518 1105 aaKnown RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 DUSP11O75319 330 aaKnown RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 FGAP02671 866 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 CST5P28325 142 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 TLE2Q04725 743 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 AAMPQ13685 434 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ACVR2BQ13705 512 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 MCMDC2Q4G0Z9 681 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 CCSAPQ6IQ19 270 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ARMCX2Q7L311 632 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ZNF589Q86UQ0 364 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 SMC5Q8IY18 1101 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 CCDC144CPQ8IYA2 1237 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
SND1-205ENST00000467238 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 LNPKQ9C0E8 428 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 KATNBL1Q9H079 304 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ABHD16BQ9H3Z7 469 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 HOMER2Q9NSB8 354 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 FAM184BQ9ULE4 1060 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 PRR12Q9ULL5 1215 aa8.32□□□□□ -1.08
SND1-205ENST00000467238 ISY1Q9ULR0 285 aaKnown RBP8.32□□□□□ -1.08
SND1-205ENST00000467238 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 MYADML2A6NDP7 307 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 AP1G2O75843 785 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 CLTBP09497 229 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 ITGB8P26012 769 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 ACLYP53396 1101 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 CNTN2Q02246 1040 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 IKQ13123 557 aaPredicted RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 KCNA10Q16322 511 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 TKFCQ3LXA3 575 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 CCDC144BQ3MJ40 725 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 C9orf50Q5SZB4 431 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 DCAF4Q8WV16 495 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 BADQ92934 168 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 CHMP4CQ96CF2 233 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 AGBL1Q96MI9 1066 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 A1CFQ9NQ94 594 aaKnown RBP8.31□□□□□ -1.08
SND1-205ENST00000467238 STARD7Q9NQZ5 370 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 MTMR10Q9NXD2 777 aa8.31□□□□□ -1.08
SND1-205ENST00000467238 ASTN1O14525 1302 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 MYO7AQ13402 2215 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 REV3LO60673 3130 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 CENPBP07199 599 aaPredicted RBP8.3□□□□□ -1.08
SND1-205ENST00000467238 C6orf222P0C671 652 aaPredicted RBP8.3□□□□□ -1.08
SND1-205ENST00000467238 ALAS1P13196 640 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 GJA9P57773 515 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 SNAP25P60880 206 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 SHHQ15465 462 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
SND1-205ENST00000467238 FAM109BQ6ICB4 259 aaPredicted RBP8.3□□□□□ -1.08
SND1-205ENST00000467238 CCDC174Q6PII3 467 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 BTNL9Q6UXG8 535 aa8.3□□□□□ -1.08
SND1-205ENST00000467238 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
SND1-205ENST00000467238 ANKRD33Q7Z3H0 272 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms