RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 MTMR8Q96EF0 704 aa21.9■■□□□ 1.1
SRSF4-202ENST00000466448 MAD2L2Q9UI95 211 aa21.9■■□□□ 1.1
SRSF4-202ENST00000466448 ZBTB5O15062 677 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 SORBS3O60504 671 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 GJB5O95377 273 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 HOXA13P31271 388 aaPredicted RBP21.89■■□□□ 1.09
SRSF4-202ENST00000466448 HIC1Q14526 733 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 HSDL1Q3SXM5 330 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 ZNF618Q5T7W0 954 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 MYSM1Q5VVJ2 828 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 CYB5R4Q7L1T6 521 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 PCDHA1Q9Y5I3 950 aa21.89■■□□□ 1.09
SRSF4-202ENST00000466448 PRRC2BQ5JSZ5 2229 aaKnown RBP21.88■■□□□ 1.09
SRSF4-202ENST00000466448 ABHD14A-ACY1A0A1B0GW23 586 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 PPFIA4O75335 1185 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 MBTPS1Q14703 1052 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 PGM5Q15124 567 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 CELF3Q5SZQ8 465 aaKnown RBP21.88■■□□□ 1.09
SRSF4-202ENST00000466448 VSIG10LQ86VR7 867 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 IL31RAQ8NI17 732 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 GDPD5Q8WTR4 605 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 HLA-CQ95604 372 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 SPATA33Q96N06 139 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 MAP3K20Q9NYL2 800 aaKnown RBP21.88■■□□□ 1.09
SRSF4-202ENST00000466448 MTUS1Q9ULD2 1270 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 TET1Q8NFU7 2136 aa21.88■■□□□ 1.09
SRSF4-202ENST00000466448 PALM3A6NDB9 673 aaPredicted RBP21.87■■□□□ 1.09
SRSF4-202ENST00000466448 GGPS1O95749 300 aa21.87■■□□□ 1.09
SRSF4-202ENST00000466448 SP2Q02086 613 aa21.87■■□□□ 1.09
SRSF4-202ENST00000466448 IKBKEQ14164 716 aa21.87■■□□□ 1.09
SRSF4-202ENST00000466448 SLC35G1Q2M3R5 365 aa21.87■■□□□ 1.09
SRSF4-202ENST00000466448 RAD9AQ99638 391 aa21.87■■□□□ 1.09
SRSF4-202ENST00000466448 PTPRSQ13332 1948 aa21.86■■□□□ 1.09
SRSF4-202ENST00000466448 KIAA1217Q5T5P2 1943 aa21.86■■□□□ 1.09
SRSF4-202ENST00000466448 COL4A4P53420 1690 aaPredicted RBP21.86■■□□□ 1.09
SRSF4-202ENST00000466448 EFCAB14O75071 495 aa21.86■■□□□ 1.09
SRSF4-202ENST00000466448 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
SRSF4-202ENST00000466448 KCNV1Q6PIU1 500 aa21.86■■□□□ 1.09
SRSF4-202ENST00000466448 HOMER1Q86YM7 354 aa21.86■■□□□ 1.09
SRSF4-202ENST00000466448 ZFP91Q96JP5 570 aaPredicted RBP21.86■■□□□ 1.09
SRSF4-202ENST00000466448 LINC01553A4QN01 128 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 FAM117BQ6P1L5 589 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 SAMD3Q8N6K7 520 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 EXOC6Q8TAG9 804 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 GPKOWQ92917 476 aaPredicted RBP eCLIP21.85■■□□□ 1.092e-6■■□□□ 13.7
SRSF4-202ENST00000466448 PIGSQ96S52 555 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 C16orf70Q9BSU1 422 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 C1QTNF1Q9BXJ1 281 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 SUGCTQ9HAC7 445 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 LMCD1Q9NZU5 365 aa21.85■■□□□ 1.09
SRSF4-202ENST00000466448 LGR5O75473 907 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 TGFB3P10600 412 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 CCND2P30279 289 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 ERVK-21P61565 698 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 SERINC5Q86VE9 423 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 TGS1Q96RS0 853 aaKnown RBP21.84■■□□□ 1.09
SRSF4-202ENST00000466448 NCOR1O75376 2440 aa21.84■■□□□ 1.09
SRSF4-202ENST00000466448 EMSYQ7Z589 1322 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 GCOM1H8Y6P7 765 aaPredicted RBP21.83■■□□□ 1.09
SRSF4-202ENST00000466448 POLR2MP0CAP2 368 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 THPOP40225 353 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 MKRN4PQ13434 485 aaPredicted RBP21.83■■□□□ 1.09
SRSF4-202ENST00000466448 GRM4Q14833 912 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.83■■□□□ 1.093e-7■■■□□ 16.8
SRSF4-202ENST00000466448 FCHSD1Q86WN1 690 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 BCAS3Q9H6U6 928 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 RIOX1Q9H6W3 641 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 SENP2Q9HC62 589 aa21.83■■□□□ 1.09
SRSF4-202ENST00000466448 RSPH10B2B2RC85 870 aa21.82■■□□□ 1.08
SRSF4-202ENST00000466448 CYTH3O43739 400 aa21.82■■□□□ 1.08
SRSF4-202ENST00000466448 RSPH10BP0C881 870 aa21.82■■□□□ 1.08
SRSF4-202ENST00000466448 DBF4BQ8NFT6 615 aa21.82■■□□□ 1.08
SRSF4-202ENST00000466448 MLXIPQ9HAP2 919 aa21.82■■□□□ 1.08
SRSF4-202ENST00000466448 TRIP12Q14669 1992 aaPredicted RBP21.81■■□□□ 1.08
SRSF4-202ENST00000466448 C17orf102A2RUQ5 167 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 H3BRB1 525 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 CYP21A2P08686 494 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 GSPT1P15170 499 aaKnown RBP21.81■■□□□ 1.08
SRSF4-202ENST00000466448 HOXC8P31273 242 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 TRDNQ13061 729 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 TRAF1Q13077 416 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 ATP6V0A1Q93050 837 aa21.81■■□□□ 1.08
SRSF4-202ENST00000466448 TUT1Q9H6E5 874 aaKnown RBP21.81■■□□□ 1.08
SRSF4-202ENST00000466448 TCF20Q9UGU0 1960 aaKnown RBP21.81■■□□□ 1.08
SRSF4-202ENST00000466448 IFIT3O14879 490 aaKnown RBP21.8■■□□□ 1.08
SRSF4-202ENST00000466448 LGALS2P05162 132 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 SMIM10L2AP0DMW4 78 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 SMIM10L2BP0DMW5 78 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 TROAPQ12815 778 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 C17orf80Q9BSJ5 609 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 EPHX3Q9H6B9 360 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 INSL6Q9Y581 213 aa21.8■■□□□ 1.08
SRSF4-202ENST00000466448 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
SRSF4-202ENST00000466448 AMHP03971 560 aa21.79■■□□□ 1.08
SRSF4-202ENST00000466448 PDE4AP27815 886 aa21.79■■□□□ 1.08
SRSF4-202ENST00000466448 MRPS9P82933 396 aaKnown RBP21.79■■□□□ 1.08
SRSF4-202ENST00000466448 PTH1RQ03431 593 aa21.79■■□□□ 1.08
SRSF4-202ENST00000466448 GNPTABQ3T906 1256 aa21.79■■□□□ 1.08
SRSF4-202ENST00000466448 PLEKHG4Q58EX7 1191 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms