RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC3-205ENST00000462715 FAM155AB1AL88 458 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 CYP21A2P08686 494 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 PECAM1P16284 738 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 VEGFBP49765 207 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 RRP12Q5JTH9 1297 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ESR2Q92731 530 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 KRT23Q9C075 422 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 EPN3Q9H201 632 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ZSWIM4Q9H7M6 989 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 CPSF2Q9P2I0 782 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 PPFIA3O75145 1194 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ZNF18P17022 549 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 CCNHP51946 323 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 STK38Q15208 465 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ZC3H12AQ5D1E8 599 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 CCDC70Q6NSX1 233 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 FAM43BQ6ZT52 329 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 ENOX1Q8TC92 643 aaKnown RBP12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 WDR18Q9BV38 432 aa12.72□□□□□ -0.37
TRAPPC3-205ENST00000462715 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 A0A1B0GVL5 298 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 CXCL11O14625 94 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 MYBL2P10244 700 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 GTF2A2P52657 109 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 JAG1P78504 1218 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 TFAP4Q01664 338 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 SEPT2Q15019 361 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 ZNF662Q6ZS27 426 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 KANSL2Q9H9L4 492 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 HOOK1Q9UJC3 728 aaKnown RBP12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 AFG3L2Q9Y4W6 797 aa12.71□□□□□ -0.37
TRAPPC3-205ENST00000462715 TMEM232C9JQI7 657 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 SPTLC2O15270 562 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 GJA5P36382 358 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 ITIH3Q06033 890 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 SREBF2Q12772 1141 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 NNTQ13423 1086 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 TMTC1Q8IUR5 882 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 PDILTQ8N807 584 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 SH2D4AQ9H788 454 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 ARHGEF10LQ9HCE6 1279 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 INCENPQ9NQS7 918 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.38
TRAPPC3-205ENST00000462715 A0A087WWV3 80 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 NR1I3Q14994 352 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 KDM7AQ6ZMT4 941 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 SLC35F6Q8N357 371 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 AENQ8WTP8 325 aaKnown RBP12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 SELENOOQ9BVL4 669 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 TRIM75PA6NK02 468 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 E7EWF7 191 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 CETPP11597 493 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 GCKP35557 465 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 SPP2Q13103 211 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 CNGA4Q8IV77 575 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 HPSEQ9Y251 543 aa12.7□□□□□ -0.38
TRAPPC3-205ENST00000462715 ITIH6Q6UXX5 1313 aa12.69□□□□□ -0.38
TRAPPC3-205ENST00000462715 A0A1B0GTH6 734 aa12.69□□□□□ -0.38
TRAPPC3-205ENST00000462715 USP17L10C9JJH3 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms