RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	DNAH12	Q6ZR08	3092 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	SYNRG	Q9UMZ2	1314 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PFKFB2	O60825	505 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	RGS20	O76081	388 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PGK1	P00558	417 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	NR3C2	P08235	984 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	SCG2	P13521	617 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	SMPD1	P17405	629 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PTGS1	P23219	599 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PSEN2	P49810	448 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	TNFAIP2	Q03169	654 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PDE4D	Q08499	809 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	LRRC41	Q15345	812 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	ME3	Q16798	604 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	ARHGEF16	Q5VV41	709 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	IQSEC1	Q6DN90	963 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PPP1R18	Q6NYC8	613 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	NECAB2	Q7Z6G3	386 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	VSIG10L	Q86VR7	867 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	FCHSD1	Q86WN1	690 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	ARRDC4	Q8NCT1	418 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	KLHDC9	Q8NEP7	349 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	IL31RA	Q8NI17	732 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	UPF3A	Q9H1J1	476 aa	Known RBP	11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	RBM27	Q9P2N5	1060 aa	Known RBP	11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	PLXNA1	Q9UIW2	1896 aa		11.42	□□□□□ -0.58
CHEK2-221	ENST00000456369	MYADML2	A6NDP7	307 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369		B4DLN1	442 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	PPFIA3	O75145	1194 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	EIF3J	O75822	258 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	LARGE1	O95461	756 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	CTDNEP1	O95476	244 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	PDIA4	P13667	645 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	CST5	P28325	142 aa	Predicted RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	MRPL12	P52815	198 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	GJA9	P57773	515 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	STK3	Q13188	491 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	PGM5	Q15124	567 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	STXBP2	Q15833	593 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	DUSP28	Q4G0W2	176 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	C6orf132	Q5T0Z8	1188 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	GJC2	Q5T442	439 aa	Predicted RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	CCDC62	Q6P9F0	684 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	MPHOSPH6	Q99547	160 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	WDR11	Q9BZH6	1224 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	C11orf49	Q9H6J7	331 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	RIC8A	Q9NPQ8	531 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	LIMCH1	Q9UPQ0	1083 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369		Q9Y3F1	56 aa		11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-221	ENST00000456369	ESYT2	A0FGR8	921 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	ADAMTS3	O15072	1205 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	ARIH2	O95376	493 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	MCM4	P33991	863 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	CLK2	P49760	499 aa	Known RBP	11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	NAPA	P54920	295 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	MRPS9	P82933	396 aa	Known RBP	11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	ST3GAL1	Q11201	340 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	UBE2S	Q16763	222 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	RNF180	Q86T96	592 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	SMARCC2	Q8TAQ2	1214 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	SCFD2	Q8WU76	684 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	SLC26A6	Q9BXS9	759 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	ZMYND12	Q9H0C1	365 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	PHF24	Q9UPV7	400 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	LRRC37A2	A6NM11	1700 aa		11.4	□□□□□ -0.58
CHEK2-221	ENST00000456369	SMCO2	A6NFE2	343 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	TULP1	O00294	542 aa	Predicted RBP	11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	CPLX1	O14810	134 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	ADCY7	P51828	1080 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	PCNX4	Q63HM2	1172 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	TLK2	Q86UE8	772 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	NECAB1	Q8N987	351 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	TNPO1	Q92973	898 aa	Known RBP	11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	CUL5	Q93034	780 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	GTF3C6	Q969F1	213 aa		11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	INPP4A	Q96PE3	977 aa	Predicted RBP	11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	TSEN34	Q9BSV6	310 aa	Known RBP	11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.39	□□□□□ -0.59
CHEK2-221	ENST00000456369	MOXD2P	A6NHM9	499 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	KBTBD13	C9JR72	458 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	GOLGA6L22	H0YM25	854 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	NKRF	O15226	690 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	DYNC1LI2	O43237	492 aa	Predicted RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	STAM2	O75886	525 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	C6orf222	P0C671	652 aa	Predicted RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	TXN	P10599	105 aa	Known RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	CCND2	P30279	289 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	ACLY	P53396	1101 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	SSRP1	Q08945	709 aa	Known RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	SNX17	Q15036	470 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	KCNA10	Q16322	511 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	XRRA1	Q6P2D8	792 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	CPLX2	Q6PUV4	134 aa	Known RBP	11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	SEPT14	Q6ZU15	432 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	TRIM22	Q8IYM9	498 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	AIFM3	Q96NN9	605 aa		11.38	□□□□□ -0.59
CHEK2-221	ENST00000456369	HTATIP2	Q9BUP3	242 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms