RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ANKRD20A12PQ8NF67 263 aa10.57□□□□□ -0.72
CUX1-206ENST00000437600 SNX29Q8TEQ0 813 aa10.57□□□□□ -0.72
CUX1-206ENST00000437600 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
CUX1-206ENST00000437600 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
CUX1-206ENST00000437600 LUC7L2Q9Y383 392 aaKnown RBP10.57□□□□□ -0.72
CUX1-206ENST00000437600 LTBP3Q9NS15 1303 aa10.57□□□□□ -0.72
CUX1-206ENST00000437600 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 RASSF10A6NK89 507 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 E9PMD0 336 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 EPHB6O15197 1021 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 TPM1P09493 284 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 GYS2P54840 703 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 HDLBPQ00341 1268 aaKnown RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 DGKZQ13574 1117 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 KIAA1755Q5JYT7 1200 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 WDR59Q6PJI9 974 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 TRMT1LQ7Z2T5 733 aaKnown RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 CNGA4Q8IV77 575 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 NELFCDQ8IXH7 590 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 CCDC17Q96LX7 622 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 PNMA5Q96PV4 448 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 NOC4LQ9BVI4 516 aaKnown RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 EHD4Q9H223 541 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 PSTPIP2Q9H939 334 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 REXO2Q9Y3B8 237 aaKnown RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 PCDHA1Q9Y5I3 950 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 MRFAP1Q9Y605 127 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 EPN1Q9Y6I3 576 aaPredicted RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 MYO3BQ8WXR4 1341 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 MEIS1O00470 390 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 KIF5CO60282 957 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 IRX3P78415 501 aaPredicted RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 SMCR8Q8TEV9 937 aaPredicted RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 CALML4Q96GE6 196 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 CNOT6LQ96LI5 555 aaKnown RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 MAGEC2Q9UBF1 373 aaPredicted RBP10.56□□□□□ -0.72
CUX1-206ENST00000437600 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
CUX1-206ENST00000437600 PNMA6FA0A0J9YX94 578 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 ZBTB5O15062 677 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 H2AFXP16104 143 aaPredicted RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 HOXA13P31271 388 aaPredicted RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 PRKG1Q13976 671 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 CDC37Q16543 378 aaPredicted RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 TATDN1Q6P1N9 297 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 SV2BQ7L1I2 683 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 CYP2W1Q8TAV3 490 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 DDX12PQ92771 950 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 CAPZA3Q96KX2 299 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 PSMB7Q99436 277 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 P2RX7Q99572 595 aaKnown RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 LACRTQ9GZZ8 138 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 SOCS7O14512 581 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 SASH3O75995 380 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 TMEM179Q6ZVK1 233 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 DAGLBQ8NCG7 672 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 HAS1Q92839 578 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 P2RX5Q93086 422 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 GDAP1L1Q96MZ0 367 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 MTMR9Q96QG7 549 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 FEZ1Q99689 392 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 VPS33BQ9H267 617 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 MMRN2Q9H8L6 949 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 HACL1Q9UJ83 578 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 FHOD1Q9Y613 1164 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 MACROD2A1Z1Q3 448 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 NDUFA10O95299 355 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 UBXN2AP68543 259 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 STIM1Q13586 685 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 GPATCH4Q5T3I0 446 aaKnown RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 OR8K1Q8NGG5 319 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 PCDHA12Q9UN75 941 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 KIAA1024Q9UPX6 916 aa10.55□□□□□ -0.72
CUX1-206ENST00000437600 MORC2Q9Y6X9 1032 aaPredicted RBP10.55□□□□□ -0.72
CUX1-206ENST00000437600 ARHGAP25P42331 645 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 RASA3Q14644 834 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
CUX1-206ENST00000437600 CYP26C1Q6V0L0 522 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 LARP4BQ92615 738 aaKnown RBP10.54□□□□□ -0.72
CUX1-206ENST00000437600 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 EFCAB8A8MWE9 144 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
CUX1-206ENST00000437600 NT5C2P49902 561 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 GALNT17Q6IS24 598 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 TMCO3Q6UWJ1 677 aa10.54□□□□□ -0.72
CUX1-206ENST00000437600 DNAAF5Q86Y56 855 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms