RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.058e-6■■■■□ 26
EDEM1-202ENST00000434243 NKX2-4Q9H2Z4 354 aa15.37■□□□□ 0.05
EDEM1-202ENST00000434243 HDAC6Q9UBN7 1215 aa15.37■□□□□ 0.05
EDEM1-202ENST00000434243 hCG_1642624A0A1W2PR95 340 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 TGFB3P10600 412 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
EDEM1-202ENST00000434243 UBA1P22314 1058 aaKnown RBP15.36■□□□□ 0.05
EDEM1-202ENST00000434243 RFC2P35250 354 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 SP2Q02086 613 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 HSDL1Q3SXM5 330 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 SESTD1Q86VW0 696 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 MICU3Q86XE3 530 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 GAS2L1Q99501 681 aaPredicted RBP15.36■□□□□ 0.05
EDEM1-202ENST00000434243 SLC28A3Q9HAS3 691 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 GTF2IRD1Q9UHL9 959 aa15.36■□□□□ 0.05
EDEM1-202ENST00000434243 NOP56O00567 594 aaKnown RBP15.35■□□□□ 0.05
EDEM1-202ENST00000434243 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 CDC45O75419 566 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 VWCEQ96DN2 955 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
EDEM1-202ENST00000434243 YBX2Q9Y2T7 364 aaKnown RBP15.35■□□□□ 0.05
EDEM1-202ENST00000434243 STAM2O75886 525 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 F2P00734 622 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 MRPS9P82933 396 aaKnown RBP15.34■□□□□ 0.05
EDEM1-202ENST00000434243 NEDD9Q14511 834 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 AFAP1L1Q8TED9 768 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 PPM1EQ8WY54 764 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
EDEM1-202ENST00000434243 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 HAS3O00219 553 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 MEIS2O14770 477 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 FIBPO43427 364 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 MYOGP15173 224 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 SELPP16109 830 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 IGFBP4P22692 258 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 FGD1P98174 961 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
EDEM1-202ENST00000434243 SP4Q02446 784 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 PPP2R2DQ66LE6 453 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 LRRC8DQ7L1W4 858 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 CYFIP1Q7L576 1253 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 HEATR3Q7Z4Q2 680 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 NLRX1Q86UT6 975 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 INPP4AQ96PE3 977 aaPredicted RBP15.33■□□□□ 0.04
EDEM1-202ENST00000434243 BCAS3Q9H6U6 928 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 NAP1L2Q9ULW6 460 aaPredicted RBP15.33■□□□□ 0.04
EDEM1-202ENST00000434243 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
EDEM1-202ENST00000434243 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 CKBP12277 381 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 ICAM3P32942 547 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 PTK7Q13308 1070 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 PCNX4Q63HM2 1172 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 DHX32Q7L7V1 743 aaKnown RBP15.32■□□□□ 0.04
EDEM1-202ENST00000434243 DHX38Q92620 1227 aaKnown RBP15.32■□□□□ 0.04
EDEM1-202ENST00000434243 CTAGE1Q96RT6 745 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 FRMPD4Q14CM0 1322 aa15.32■□□□□ 0.04
EDEM1-202ENST00000434243 MYH6P13533 1939 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 C17orf102A2RUQ5 167 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 H3BRB1 525 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 ZBTB43O43298 467 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 LGALS2P05162 132 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 HOXD8P13378 290 aaPredicted RBP15.31■□□□□ 0.04
EDEM1-202ENST00000434243 KCNJ6P48051 423 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 KRT32Q14532 448 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 UBE2SQ16763 222 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 RTN1Q16799 776 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 ADCK5Q3MIX3 580 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
EDEM1-202ENST00000434243 XRRA1Q6P2D8 792 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 SLC9A7Q96T83 725 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 C16orf70Q9BSU1 422 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 TUT1Q9H6E5 874 aaKnown RBP15.31■□□□□ 0.04
EDEM1-202ENST00000434243 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
EDEM1-202ENST00000434243 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
EDEM1-202ENST00000434243 PARNO95453 639 aaKnown RBP15.3■□□□□ 0.04
EDEM1-202ENST00000434243 THPOP40225 353 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 EXOSC10Q01780 885 aaKnown RBP15.3■□□□□ 0.04
EDEM1-202ENST00000434243 SEMA3FQ13275 785 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 ZNF618Q5T7W0 954 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 PHOSPHO2Q8TCD6 241 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 ATP6V0A1Q93050 837 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 GPR20Q99678 358 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 PCDHA6Q9UN73 950 aa15.3■□□□□ 0.04
EDEM1-202ENST00000434243 PCDHA8Q9Y5H6 950 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms