RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 DPYDQ12882 1025 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 PPFIA1Q13136 1202 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 UBE3CQ15386 1083 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-202ENST00000432306 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 CCDC91Q7Z6B0 441 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 ATL2Q8NHH9 583 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 HLA-CQ95604 372 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
VTI1A-202ENST00000432306 CNTNAP1P78357 1384 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 SYNRGQ9UMZ2 1314 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 POLR2DO15514 142 aaKnown RBP8.95□□□□□ -0.98
VTI1A-202ENST00000432306 GPAA1O43292 621 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 ZBTB43O43298 467 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 PRLRP16471 622 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 TNFRSF8P28908 595 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 CABP4P57796 275 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 TIMM10P62072 90 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 HLTFQ14527 1009 aaKnown RBP eCLIP8.95□□□□□ -0.982e-6■■■■□ 23.7
VTI1A-202ENST00000432306 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 MEA1Q16626 185 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 PPP4R4Q6NUP7 873 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 YTHDF3Q7Z739 585 aaKnown RBP8.95□□□□□ -0.98
VTI1A-202ENST00000432306 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 CHPFQ8IZ52 775 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 TTC30BQ8N4P2 665 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 ZNF496Q96IT1 587 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-202ENST00000432306 FAM161BQ96MY7 647 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 AIFM3Q96NN9 605 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 DNAJC7Q99615 494 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 PYM1Q9BRP8 204 aaKnown RBP8.95□□□□□ -0.98
VTI1A-202ENST00000432306 LY9Q9HBG7 655 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 GGA2Q9UJY4 613 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 GRIN2DO15399 1336 aa8.95□□□□□ -0.98
VTI1A-202ENST00000432306 A0A0U1RQJ8 604 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 POTECB2RU33 542 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 RHOXF2BP0C7M4 288 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 GJA5P36382 358 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 TRAPPC10P48553 1259 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 STIM1Q13586 685 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 SAFBQ15424 915 aaKnown RBP eCLIP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ECM1Q16610 540 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ARSHQ5FYA8 562 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CCNI2Q6ZMN8 369 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CYB5R4Q7L1T6 521 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 TRMT44Q8IYL2 757 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 MMGT1Q8N4V1 131 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 TEX19Q8NA77 164 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 FAM76AQ8TAV0 307 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 AENQ8WTP8 325 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ATRIPQ8WXE1 791 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 RHOXF2Q9BQY4 288 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PLA2G12BQ9BX93 195 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PUS7LQ9H0K6 701 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 MUC3BQ9H195 1237 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ZNF69Q9UC07 566 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PARP2Q9UGN5 583 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 RWDD2AQ9UIY3 292 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 FAM184BQ9ULE4 1060 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 REXO2Q9Y3B8 237 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ECM29Q5VYK3 1845 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CCDC196A0A1B0GTZ2 297 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 GOLGA8KD6RF30 607 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 TK2O00142 265 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 EBAG9O00559 213 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 EIF3HO15372 352 aaKnown RBP eCLIP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PRMT3O60678 531 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 NDUFA10O95299 355 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 BPNT1O95861 308 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CTHP32929 405 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ADD2P35612 726 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 IRAK1P51617 712 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CDK17Q00537 523 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 SSRP1Q08945 709 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CBLBQ13191 982 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 PTPN21Q16825 1174 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 WWC2Q6AWC2 1192 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 IQCEQ6IPM2 695 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 RAVER1Q8IY67 606 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 DIS3L2Q8IYB7 885 aaKnown RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 MICALL1Q8N3F8 863 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 ACRBPQ8NEB7 543 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 FERMT2Q96AC1 680 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 HMX1Q9NP08 348 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CHST12Q9NRB3 414 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CWC25Q9NXE8 425 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 SAR1BQ9Y6B6 198 aa8.94□□□□□ -0.98
VTI1A-202ENST00000432306 EPN1Q9Y6I3 576 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-202ENST00000432306 CACNA1SQ13698 1873 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms