RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 TPM1P09493 284 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 CASQ1P31415 396 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 SPIRE1Q08AE8 756 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 COASYQ13057 564 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 ETNPPLQ8TBG4 499 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 ZFP91Q96JP5 570 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 TRIM10Q9UDY6 481 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 TUBB4AP04350 444 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 ARHGAP25P42331 645 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
SCAMP4-202ENST00000409472 PVALEFA0A1B0GWK0 134 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 A0A1W2PQC6 194 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 EPHB6O15197 1021 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 CAPN2P17655 700 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 TRIM14Q14142 442 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 MBOAT7Q96N66 472 aa16.9■□□□□ 0.3
SCAMP4-202ENST00000409472 MEIS1O00470 390 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 TADA3O75528 432 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 SEMA3FQ13275 785 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 COBLL1Q53SF7 1204 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 CYP26C1Q6V0L0 522 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 TMTC1Q8IUR5 882 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 DNAJC7Q99615 494 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 MRFAP1Q9Y605 127 aa16.89■□□□□ 0.3
SCAMP4-202ENST00000409472 CYP3A7-CYP3A51PA0A087WV96 503 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 CYP3A7P24462 503 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 DNM2P50570 870 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 PSMC6P62333 389 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 HYIQ5T013 277 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 ZBTB21Q9ULJ3 1066 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 CAPN11Q9UMQ6 739 aa16.89■□□□□ 0.29
SCAMP4-202ENST00000409472 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 USP11P51784 963 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 AP3B2Q13367 1082 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 ZNF397Q8NF99 534 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 BCAS3Q9H6U6 928 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 EFCC1Q9HA90 598 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 LUC7L2Q9Y383 392 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 TRIM21P19474 475 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 ARHGAP29Q52LW3 1261 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 ZNF569Q5MCW4 686 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 NCAPH2Q6IBW4 605 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 BTNL9Q6UXG8 535 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 YY1AP1Q9H869 796 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 ZNF446Q9NWS9 450 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
SCAMP4-202ENST00000409472 ERICH4A6NGS2 130 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 SREBF1P36956 1147 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 UBXN2AP68543 259 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 ARSHQ5FYA8 562 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 GPBP1Q86WP2 473 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 SLC35F6Q8N357 371 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 OR8K1Q8NGG5 319 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 MSH4O15457 936 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 NDUFA10O95299 355 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 CYP11B2P19099 503 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 MMP14P50281 582 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 STAT2P52630 851 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 HERVK_113P62684 666 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 CYP4A11Q02928 519 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 CATSPER3Q86XQ3 398 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 NELFCDQ8IXH7 590 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 MNS1Q8NEH6 495 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 PSMD1Q99460 953 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
SCAMP4-202ENST00000409472 SPATA31C1P0DKV0 1188 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 NBPF9Q3BBW0 867 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 ZCWPW2Q504Y3 356 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 FAM26FQ5R3K3 315 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms