RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 POTECB2RU33 542 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 TGFB2P61812 414 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 EXOC3L4Q17RC7 722 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 POTEBQ6S5H4 581 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 BANK1Q8NDB2 785 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
PTPRN2-202ENST00000389416 KIF13AQ9H1H9 1805 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 COG2Q14746 738 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 PPP1R18Q6NYC8 613 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 ZNF280CQ8ND82 737 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 DDX12PQ92771 950 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 NAPGQ99747 312 aaPredicted RBP14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 JPH2Q9BR39 696 aaPredicted RBP14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 NUCKS1Q9H1E3 243 aaKnown RBP14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 GOLPH3LQ9H4A5 285 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 C1orf112Q9NSG2 853 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 SRGAP2CP0DJJ0 459 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 YARSP54577 528 aaKnown RBP14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 CBX1P83916 185 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 RASSF7Q02833 373 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 RETREG2Q8NC44 543 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 IFT81Q8WYA0 676 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 ACAD9Q9H845 621 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 PRR12Q9ULL5 1215 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 MYL1P05976 194 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 TFDP1Q14186 410 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 RIC8AQ9NPQ8 531 aa14.4□□□□□ -0.1
PTPRN2-202ENST00000389416 IPO5O00410 1097 aaKnown RBP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 CCNE1P24864 410 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 TNNC2P02585 160 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 PEX3P56589 373 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 GOLGA8FQ08AF8 430 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 GOLGA8DPQ0D2H9 430 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 RTFDC1Q9BY42 306 aaPredicted RBP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 CWC15Q9P013 229 aaKnown RBP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 IKBKBO14920 756 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 CASP14P31944 242 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 TROAPQ12815 778 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 NLRP4Q96MN2 994 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 POTEFA5A3E0 1075 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 FDPSP14324 419 aaKnown RBP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 OSTNP61366 133 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 POTEEQ6S8J3 1075 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 FAM49AQ9H0Q0 323 aaPredicted RBP14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
PTPRN2-202ENST00000389416 DDIT3P35638 169 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 PTPROQ16827 1216 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 SPOUT1Q5T280 376 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 ANKRD13CQ8N6S4 541 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 ENOX1Q8TC92 643 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 ANAPC4Q9UJX5 808 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 WDR64B1ANS9 1081 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 PSMC2P35998 433 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 C9orf131Q5VYM1 1079 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 FMR1NBQ8N0W7 255 aaPredicted RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 RNF34Q969K3 372 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 DYNC1I1O14576 645 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 FBXO41Q8TF61 875 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 LPAR1Q92633 364 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 CCDC51Q96ER9 411 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 CCDC114Q96M63 670 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 KCNQ5Q9NR82 932 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 FBXO28Q9NVF7 368 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 CTDNEP1O95476 244 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 MYZAPP0CAP1 466 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 PRELPP51888 382 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 AGTPBP1Q9UPW5 1226 aa14.38□□□□□ -0.11
PTPRN2-202ENST00000389416 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 P4HA1P13674 534 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 IL1R1P14778 569 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 SHC4Q6S5L8 630 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 CCDC25Q86WR0 208 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 ACER1Q8TDN7 264 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 ZKSCAN4Q969J2 545 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 TBC1D22BQ9NU19 505 aa14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-202ENST00000389416 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms