RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 APOEP02649 317 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 MT-ND3P03897 115 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 IFNAR2P48551 515 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 PLTPP55058 493 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 KRT80Q6KB66 452 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CENPUQ71F23 418 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 VIPAS39Q9H9C1 493 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 EXOC1LA0A1B0GW35 172 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ESRRAP11474 423 aaPredicted RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 TGFBRAP1Q8WUH2 860 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 DTNBP1Q96EV8 351 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 WDR11Q9BZH6 1224 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.755e-7■■□□□ 12.3
SNX1-202ENST00000380285 FAM8A1Q9UBU6 413 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 SOWAHDA6NJG2 315 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ECE1P42892 770 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 PPP2R5DQ14738 602 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 XAB2Q9HCS7 855 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 M0QZ92 97 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 PIK3CAP42336 1068 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 MORC4Q8TE76 937 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ADPGKQ9BRR6 497 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 PRPF3O43395 683 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 CREB3O43889 395 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 MESDQ14696 234 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ZNF449Q6P9G9 518 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 PPWD1Q96BP3 646 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 NOC2LQ9Y3T9 749 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 S100BP04271 92 aaPredicted RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
SNX1-202ENST00000380285 E2F5Q15329 346 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 USH1GQ495M9 461 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ACCSQ96QU6 501 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 MTA3Q9BTC8 594 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 FBXO11Q86XK2 927 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 PIP4K2CQ8TBX8 421 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ZNF653Q96CK0 615 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 BATF3Q9NR55 127 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 SPAG7O75391 227 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 ACSBG1Q96GR2 724 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
SNX1-202ENST00000380285 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 SURF1Q15526 300 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 CCPG1Q9ULG6 757 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 PTPN22Q9Y2R2 807 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ATP10AO60312 1499 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ZNF233A6NK53 670 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 H7C0C1 242 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 XPOTO43592 962 aaKnown RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 ATP5OP48047 213 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 NDE1Q9NXR1 346 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 GCNT4Q9P109 453 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 CAPN9O14815 690 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 VPS41P49754 854 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 RCN2Q14257 317 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 TMED2Q15363 201 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 FSCBQ5H9T9 825 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 CRLF3Q8IUI8 442 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 CCDC138Q96M89 665 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 SAMD9LQ8IVG5 1584 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 CEBPAP49715 358 aaPredicted RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 TNFAIP1Q13829 316 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 TTC19Q6DKK2 380 aaPredicted RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 NOVA2Q9UNW9 492 aaKnown RBP10.35□□□□□ -0.75
SNX1-202ENST00000380285 TMEM191BP0C7N4 346 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 MAEAQ7L5Y9 396 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 LGR6Q9HBX8 967 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 MAD1L1Q9Y6D9 718 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 GMNCA6NCL1 334 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 GGPS1O95749 300 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 CHGBP05060 677 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ART3Q13508 389 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ADCK5Q3MIX3 580 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 MB21D1Q8N884 522 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 POMGNT1Q8WZA1 660 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 NACC1Q96RE7 527 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 TRIM55Q9BYV6 548 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 YY1AP1Q9H869 796 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
SNX1-202ENST00000380285 ARHGAP10A1A4S6 786 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 GNPATO15228 680 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 CYP21A2P08686 494 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 EIF6P56537 245 aaKnown RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 PDIK1LQ8N165 341 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 NDST4Q9H3R1 872 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 POLR1AO95602 1720 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms