RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CASQ1P31415 396 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 PPP1R2P41236 205 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 MTF1Q14872 753 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 NOC3LQ8WTT2 800 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 MKL1Q969V6 931 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 SLC10A4Q96EP9 437 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 HHIPL1Q96JK4 782 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 NYAP2Q9P242 653 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CLK2P49760 499 aaKnown RBP13.5□□□□□ -0.25
HMGCL-202ENST00000374487 ICA1Q05084 483 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 SEPT2Q15019 361 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 DCAF4Q8WV16 495 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
HMGCL-202ENST00000374487 POTEMA6NI47 508 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 ECE1P42892 770 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 IREB2P48200 963 aaKnown RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 STK4Q13043 487 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 GRB10Q13322 594 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 TTI2Q6NXR4 508 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 P2RX5Q93086 422 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 MTMR8Q96EF0 704 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 OTOFQ9HC10 1997 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 FCER1AP12319 257 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 CCNE1P24864 410 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 JAG1P78504 1218 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 IKQ13123 557 aaPredicted RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 MCM6Q14566 821 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 RAD9BQ6WBX8 426 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 TMTC1Q8IUR5 882 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
HMGCL-202ENST00000374487 ABHD10Q9NUJ1 306 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 SNCAIPQ9Y6H5 919 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 MYH8P13535 1937 aa13.49□□□□□ -0.25
HMGCL-202ENST00000374487 LGALS16A8MUM7 142 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 EDIL3O43854 480 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 KRT9P35527 623 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 ELF2Q15723 593 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
HMGCL-202ENST00000374487 SPRYD7Q5W111 196 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 ANKRD40Q6AI12 368 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 DYMQ7RTS9 669 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 ANKRD13AQ8IZ07 590 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 EEF2KMTQ96G04 330 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 LRRC27Q9C0I9 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 LZTFL1Q9NQ48 299 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 F5H6K3 240 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 GDF11O95390 407 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 KLRC3Q07444 240 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
HMGCL-202ENST00000374487 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 CYP26C1Q6V0L0 522 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 PNMA5Q96PV4 448 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 TUBGCP2Q9BSJ2 902 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 ZNF341Q9BYN7 854 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 SLC39A2Q9NP94 309 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 BLOC1S4Q9NUP1 217 aa13.48□□□□□ -0.25
HMGCL-202ENST00000374487 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 MYMKA6NI61 221 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 IDEP14735 1019 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 DNM2P50570 870 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 NOGQ13253 232 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 RAD54LQ92698 747 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 HPS3Q969F9 1004 aa13.47□□□□□ -0.25
HMGCL-202ENST00000374487 WDR24Q96S15 920 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms