RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 FAM20AQ96MK3 541 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 ANO3Q9BYT9 981 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 PANK4Q9NVE7 773 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 MMP14P50281 582 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 AMPD2Q01433 879 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 NFIAQ12857 509 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 FAM26FQ5R3K3 315 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 PAPD7Q5XG87 772 aaKnown RBP20.05■□□□□ 0.8
CD40-201ENST00000372276 IQCEQ6IPM2 695 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 DYMQ7RTS9 669 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 C2CD5Q86YS7 1000 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 SYN2Q92777 582 aaPredicted RBP20.05■□□□□ 0.8
CD40-201ENST00000372276 ZNF622Q969S3 477 aaKnown RBP eCLIP20.05■□□□□ 0.8
CD40-201ENST00000372276 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 FAM184BQ9ULE4 1060 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 GUCA1BQ9UMX6 200 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 REXO2Q9Y3B8 237 aaKnown RBP20.05■□□□□ 0.8
CD40-201ENST00000372276 SLC16A2P36021 539 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 VAV2P52735 878 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 MARSP56192 900 aaKnown RBP20.05■□□□□ 0.8
CD40-201ENST00000372276 ICA1Q05084 483 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 COASYQ13057 564 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 ABCB5Q2M3G0 1257 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 TRAPPC11Q7Z392 1133 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 LUC7LQ9NQ29 371 aaKnown RBP20.05■□□□□ 0.8
CD40-201ENST00000372276 AGPAT5Q9NUQ2 364 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 SIK3Q9Y2K2 1263 aa20.05■□□□□ 0.8
CD40-201ENST00000372276 COL11A2P13942 1736 aaPredicted RBP20.04■□□□□ 0.8
CD40-201ENST00000372276 LCA5LO95447 670 aa20.04■□□□□ 0.8
CD40-201ENST00000372276 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
CD40-201ENST00000372276 HERVK_113P62684 666 aa20.04■□□□□ 0.8
CD40-201ENST00000372276 FBXO11Q86XK2 927 aa20.04■□□□□ 0.8
CD40-201ENST00000372276 COL4A3BPQ9Y5P4 624 aa20.04■□□□□ 0.8
CD40-201ENST00000372276 SAR1BQ9Y6B6 198 aa20.04■□□□□ 0.8
CD40-201ENST00000372276 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 ECE2O60344 883 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 PLA2G4BP0C869 781 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 TERF2Q15554 542 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 LRRC55Q6ZSA7 311 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 CLEC10AQ8IUN9 316 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 TRIM58Q8NG06 486 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 NEK11Q8NG66 645 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 PURBQ96QR8 312 aaKnown RBP20.03■□□□□ 0.8
CD40-201ENST00000372276 MXD3Q9BW11 206 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 DNAJC18Q9H819 358 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 FAM198AQ9UFP1 575 aa20.03■□□□□ 0.8
CD40-201ENST00000372276 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
CD40-201ENST00000372276 SSU72P8A0A1W2PR75 194 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 SPDYE3A6NKU9 549 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 CIITAP33076 1130 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 EDRF1Q3B7T1 1238 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 ZCWPW2Q504Y3 356 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 RBM26Q5T8P6 1007 aaKnown RBP20.02■□□□□ 0.8
CD40-201ENST00000372276 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 CRYGNQ8WXF5 182 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 DBNDD1Q9H9R9 158 aa20.02■□□□□ 0.8
CD40-201ENST00000372276 PUF60Q9UHX1 559 aaKnown RBP20.02■□□□□ 0.8
CD40-201ENST00000372276 FRMD3A2A2Y4 597 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 F5H6K3 240 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 TACC1O75410 805 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 PRLRP16471 622 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 SREBF1P36956 1147 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 ARHGAP4P98171 946 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 KLRC3Q07444 240 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 SYDE2Q5VT97 1194 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 HDXQ7Z353 690 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 NUDT12Q9BQG2 462 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 KIAA1024Q9UPX6 916 aa20.02■□□□□ 0.79
CD40-201ENST00000372276 SIPA1L1O43166 1804 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 DDTLA6NHG4 134 aaPredicted RBP20.01■□□□□ 0.79
CD40-201ENST00000372276 EIF3JO75822 258 aaKnown RBP20.01■□□□□ 0.79
CD40-201ENST00000372276 TBC1D8O95759 1140 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 CYP3A4P08684 503 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 BMP3P12645 472 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 CCDC40Q4G0X9 1142 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 WDR93Q6P2C0 686 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 ZC3H3Q8IXZ2 948 aaKnown RBP20.01■□□□□ 0.79
CD40-201ENST00000372276 RUBCNQ92622 972 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 SECISBP2LQ93073 1101 aaKnown RBP20.01■□□□□ 0.79
CD40-201ENST00000372276 UBXN6Q9BZV1 441 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 ACBD3Q9H3P7 528 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 TMOD2Q9NZR1 351 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 DNM3Q9UQ16 869 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 ARFGEF1Q9Y6D6 1849 aa20.01■□□□□ 0.79
CD40-201ENST00000372276 A0A0U1RQJ8 604 aa20■□□□□ 0.79
CD40-201ENST00000372276 PIK3CDO00329 1044 aa20■□□□□ 0.79
CD40-201ENST00000372276 TRAF5O00463 557 aa20■□□□□ 0.79
CD40-201ENST00000372276 MEIS2O14770 477 aa20■□□□□ 0.79
CD40-201ENST00000372276 RPA1P27694 616 aa20■□□□□ 0.79
CD40-201ENST00000372276 PLA2G4AP47712 749 aa20■□□□□ 0.79
CD40-201ENST00000372276 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
CD40-201ENST00000372276 LONRF2Q1L5Z9 754 aa20■□□□□ 0.79
CD40-201ENST00000372276 CCDC70Q6NSX1 233 aa20■□□□□ 0.79
CD40-201ENST00000372276 KCNK18Q7Z418 384 aa20■□□□□ 0.79
CD40-201ENST00000372276 GPBP1Q86WP2 473 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms