RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A0A087WWV3 80 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PLCG1P19174 1290 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CCND2P30279 289 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CNTN2Q02246 1040 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SPIRE1Q08AE8 756 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NIPA1Q7RTP0 329 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 STAMQ92783 540 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TOMM70O94826 608 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SLC10A3P09131 477 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 BCRP11274 1271 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PORCNQ9H237 461 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 KIAA1217Q5T5P2 1943 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TMEM88BA6NKF7 163 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PSMD10O75832 226 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GRB10Q13322 594 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 LRRC15Q8TF66 581 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CDK5RAP3Q96JB5 506 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PNMA5Q96PV4 448 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MROH8Q9H579 483 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PKD2L1Q9P0L9 805 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TUBE1Q9UJT0 475 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
CDK5RAP3-201ENST00000338399 IPO5O00410 1097 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 BIN1O00499 593 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GAS7O60861 476 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MTMR1Q13613 665 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SHCBP1Q8NEM2 672 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MMP19Q99542 508 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MTRQ99707 1265 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ASTN1O14525 1302 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CASP1P29466 404 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CCNA1P78396 465 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ECM1Q16610 540 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 AGO4Q9HCK5 861 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PGK2P07205 417 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DEKP35659 375 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 KCTD2Q14681 263 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 STX1AQ16623 288 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CCDC102AQ96A19 550 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 EML1O00423 815 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CHMP2AO43633 222 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FCER1AP12319 257 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 FSTL1Q12841 308 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 NLRX1Q86UT6 975 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 RIT2Q99578 217 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ANO10Q9NW15 660 aa16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-201ENST00000338399 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MED24O75448 989 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 MRE11P49959 708 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 DPYDQ12882 1025 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 CUL4BQ13620 913 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 STXBP2Q15833 593 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 HYIQ5T013 277 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
CDK5RAP3-201ENST00000338399 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms