RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 BCRP11274 1271 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 ITGB5P18084 799 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 MRPS9P82933 396 aaKnown RBP25.34■■□□□ 1.65
IRF3-201ENST00000309877 Q3C1V9 767 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 SAPCD2Q86UD0 394 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 SMC1BQ8NDV3 1235 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 SLC5A5Q92911 643 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 SMARCE1Q969G3 411 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 JADE2Q9NQC1 790 aa25.34■■□□□ 1.65
IRF3-201ENST00000309877 NR3C2P08235 984 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 ERVK-9P63128 1117 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 ERVK-24P63145 666 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 LRCH2Q5VUJ6 765 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 NCAPH2Q6IBW4 605 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 RASAL3Q86YV0 1011 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 ERMNQ8TAM6 284 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 STK24Q9Y6E0 443 aa25.33■■□□□ 1.65
IRF3-201ENST00000309877 KIF3CO14782 793 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 CCT6AP40227 531 aaKnown RBP25.32■■□□□ 1.64
IRF3-201ENST00000309877 NAALADL2Q58DX5 795 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 RGMBQ6NW40 437 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 WDR11Q9BZH6 1224 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 MAGEF1Q9HAY2 307 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 SLC26A4O43511 780 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 GAS7O60861 476 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 CAVIN2O95810 425 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 NLRP12P59046 1061 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 SPIRE1Q08AE8 756 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 GRB10Q13322 594 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 VSIG10LQ86VR7 867 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 FAM43AQ8N2R8 423 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 GPRC5AQ8NFJ5 357 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 DNERQ8NFT8 737 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 STAMQ92783 540 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 NUDT12Q9BQG2 462 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 DNAJC25Q9H1X3 360 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 KCNH7Q9NS40 1196 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 VAV3Q9UKW4 847 aa25.32■■□□□ 1.64
IRF3-201ENST00000309877 KDM3AQ9Y4C1 1321 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 POTEB2H3BUK9 544 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 IPO5O00410 1097 aaKnown RBP25.31■■□□□ 1.64
IRF3-201ENST00000309877 GCLCP48506 637 aaPredicted RBP25.31■■□□□ 1.64
IRF3-201ENST00000309877 MTMR1Q13613 665 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 HAUS3Q68CZ6 603 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 PNMA5Q96PV4 448 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 PARK7Q99497 189 aaKnown RBP25.31■■□□□ 1.64
IRF3-201ENST00000309877 MROH8Q9H579 483 aa25.31■■□□□ 1.64
IRF3-201ENST00000309877 A0A087WWV3 80 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 GTPBP6O43824 516 aaPredicted RBP25.3■■□□□ 1.64
IRF3-201ENST00000309877 PSMD10O75832 226 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 CCNA1P78396 465 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 WDR78Q5VTH9 848 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 ISM2Q6H9L7 571 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 FAM200AQ8TCP9 573 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 PTPN18Q99952 460 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 TEKT3Q9BXF9 490 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 NT5C3AQ9H0P0 336 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 STK17AQ9UEE5 414 aa25.3■■□□□ 1.64
IRF3-201ENST00000309877 TESPA1A2RU30 521 aaPredicted RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 MANSC4A6NHS7 340 aaPredicted RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 XRCC6P12956 609 aaKnown RBP eCLIP25.29■■□□□ 1.64
IRF3-201ENST00000309877 NT5DC1Q5TFE4 455 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 OTOP1Q7RTM1 612 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 NLRX1Q86UT6 975 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 SHCBP1Q8NEM2 672 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 IWS1Q96ST2 819 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 RIT2Q99578 217 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 SARSP49591 514 aaKnown RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 CNTN2Q02246 1040 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 DPYDQ12882 1025 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 KCTD2Q14681 263 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 TMEM119Q4V9L6 283 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.29■■□□□ 1.64
IRF3-201ENST00000309877 ANKRD13CQ8N6S4 541 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 NAT10Q9H0A0 1025 aaKnown RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 AGO4Q9HCK5 861 aaKnown RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 KBTBD4Q9NVX7 518 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 ADD3Q9UEY8 706 aaKnown RBP25.29■■□□□ 1.64
IRF3-201ENST00000309877 TLL2Q9Y6L7 1015 aa25.29■■□□□ 1.64
IRF3-201ENST00000309877 STAM2O75886 525 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 CASP1P29466 404 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 ZNF165P49910 485 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 AMPD3Q01432 767 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 PPP2R5CQ13362 524 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 HYIQ5T013 277 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 SPATA20Q8TB22 786 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 LRRC15Q8TF66 581 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 MMP19Q99542 508 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 MTRQ99707 1265 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 BLZF1Q9H2G9 400 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 PKD2L1Q9P0L9 805 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 MAN1B1Q9UKM7 699 aa25.28■■□□□ 1.64
IRF3-201ENST00000309877 CHMP2AO43633 222 aa25.27■■□□□ 1.64
IRF3-201ENST00000309877 C11orf57Q6ZUT1 292 aaPredicted RBP25.27■■□□□ 1.64
IRF3-201ENST00000309877 SV2BQ7L1I2 683 aa25.27■■□□□ 1.64
IRF3-201ENST00000309877 TRIML1Q8N9V2 468 aa25.27■■□□□ 1.64
IRF3-201ENST00000309877 GPRASP2Q96D09 838 aa25.27■■□□□ 1.64
IRF3-201ENST00000309877 GSDMAQ96QA5 445 aa25.27■■□□□ 1.64
IRF3-201ENST00000309877 ABT1Q9ULW3 272 aaKnown RBP25.27■■□□□ 1.64
IRF3-201ENST00000309877 MYL1P05976 194 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms