RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W WRS1Q12109 432 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W ENA5Q12691 1091 aa3.63□□□□□ -1.83
SWI1YPL016W YPR014CQ6B0W2 109 aa3.63□□□□□ -1.83
SWI1YPL016W COX11P19516 300 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W CAM1P29547 415 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W TCD2P36101 447 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W TFA2P36145 328 aa3.63□□□□□ -1.83
SWI1YPL016W NOP4P37838 685 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W UBA4P38820 440 aa3.63□□□□□ -1.83
SWI1YPL016W YEL025CP39991 1188 aa3.63□□□□□ -1.83
SWI1YPL016W ALG8P40351 577 aa3.63□□□□□ -1.83
SWI1YPL016W LSB6P42951 607 aa3.63□□□□□ -1.83
SWI1YPL016W RET2P43621 546 aa3.63□□□□□ -1.83
SWI1YPL016W DPB11P47027 764 aaPredicted RBP3.63□□□□□ -1.83
SWI1YPL016W RPC17P47076 161 aa3.63□□□□□ -1.83
SWI1YPL016W ARO8P53090 500 aaKnown RBP3.63□□□□□ -1.83
SWI1YPL016W STD1Q02794 444 aa3.63□□□□□ -1.83
SWI1YPL016W SNO1Q03144 224 aa3.63□□□□□ -1.83
SWI1YPL016W RIM13Q03792 727 aa3.63□□□□□ -1.83
SWI1YPL016W YDR444WQ04093 687 aa3.63□□□□□ -1.83
SWI1YPL016W CSC1Q06538 782 aa3.63□□□□□ -1.83
SWI1YPL016W RFU1Q08003 200 aa3.63□□□□□ -1.83
SWI1YPL016W SLD7Q08457 257 aa3.63□□□□□ -1.83
SWI1YPL016W YLR053CQ12026 108 aa3.63□□□□□ -1.83
SWI1YPL016W SPS4P09937 338 aa3.62□□□□□ -1.83
SWI1YPL016W SAR1P20606 190 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W SEC62P21825 274 aa3.62□□□□□ -1.83
SWI1YPL016W YCR102CP25608 368 aa3.62□□□□□ -1.83
SWI1YPL016W RPS5P26783 225 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W GSP1P32835 219 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W GSP2P32836 220 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W RMA1P36001 430 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W ARA1P38115 344 aa3.62□□□□□ -1.83
SWI1YPL016W POP4P38336 279 aa3.62□□□□□ -1.83
SWI1YPL016W SRP72P38688 640 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W DED81P38707 554 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W RPS12P48589 143 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W MRPL50P53724 139 aa3.62□□□□□ -1.83
SWI1YPL016W FOL1P53848 824 aa3.62□□□□□ -1.83
SWI1YPL016W NSE5Q03718 556 aa3.62□□□□□ -1.83
SWI1YPL016W YET3Q07451 203 aa3.62□□□□□ -1.83
SWI1YPL016W PLB3Q08108 686 aa3.62□□□□□ -1.83
SWI1YPL016W GPB1Q08886 897 aa3.62□□□□□ -1.83
SWI1YPL016W YCL001W-BQ96VH2 84 aa3.62□□□□□ -1.83
SWI1YPL016W CHS1P08004 1131 aa3.62□□□□□ -1.83
SWI1YPL016W HOP09932 586 aa3.62□□□□□ -1.83
SWI1YPL016W RPD3P32561 433 aa3.62□□□□□ -1.83
SWI1YPL016W TSA1P34760 196 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W RER2P35196 286 aa3.62□□□□□ -1.83
SWI1YPL016W SNU114P36048 1008 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W ECM8P38246 354 aa3.62□□□□□ -1.83
SWI1YPL016W HSL7P38274 827 aa3.62□□□□□ -1.83
SWI1YPL016W STM1P39015 273 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W BIM1P40013 344 aa3.62□□□□□ -1.83
SWI1YPL016W YER188WP40103 239 aa3.62□□□□□ -1.83
SWI1YPL016W LAS21P40367 830 aa3.62□□□□□ -1.83
SWI1YPL016W PEX31P53203 462 aa3.62□□□□□ -1.83
SWI1YPL016W DAK1P54838 584 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W RMT2Q03305 412 aa3.62□□□□□ -1.83
SWI1YPL016W CCE1Q03702 353 aa3.62□□□□□ -1.83
SWI1YPL016W RRP17Q04031 235 aaPredicted RBP3.62□□□□□ -1.83
SWI1YPL016W ADE13Q05911 482 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W VTA1Q06263 330 aa3.62□□□□□ -1.83
SWI1YPL016W MRL1Q06815 381 aa3.62□□□□□ -1.83
SWI1YPL016W FRE5Q08908 694 aa3.62□□□□□ -1.83
SWI1YPL016W MDM32Q12171 622 aa3.62□□□□□ -1.83
SWI1YPL016W ACO1P19414 778 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SWI1YPL016W PGS1P25578 521 aa3.62□□□□□ -1.83
SWI1YPL016W GUT1P32190 709 aa3.62□□□□□ -1.83
SWI1YPL016W UTP9P38882 575 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W SAH1P39954 449 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W GET2P40056 285 aa3.62□□□□□ -1.83
SWI1YPL016W SET4P42948 560 aa3.62□□□□□ -1.83
SWI1YPL016W CAK1P43568 368 aaPredicted RBP3.62□□□□□ -1.83
SWI1YPL016W YJR141WP47172 347 aaPredicted RBP3.62□□□□□ -1.83
SWI1YPL016W SNF12P53628 566 aa3.62□□□□□ -1.83
SWI1YPL016W REG1Q00816 1014 aa3.62□□□□□ -1.83
SWI1YPL016W RUB1Q03919 77 aa3.62□□□□□ -1.83
SWI1YPL016W SEC13Q04491 297 aaKnown RBP3.62□□□□□ -1.83
SWI1YPL016W YNG1Q08465 219 aa3.62□□□□□ -1.83
SWI1YPL016W MET16P18408 261 aaPredicted RBP3.61□□□□□ -1.83
SWI1YPL016W DAL2P25335 343 aa3.61□□□□□ -1.83
SWI1YPL016W RRP7P25368 297 aaPredicted RBP3.61□□□□□ -1.83
SWI1YPL016W MRPL9P31334 269 aa3.61□□□□□ -1.83
SWI1YPL016W YHR202WP38887 602 aa3.61□□□□□ -1.83
SWI1YPL016W FAA3P39002 694 aa3.61□□□□□ -1.83
SWI1YPL016W EXO1P39875 702 aa3.61□□□□□ -1.83
SWI1YPL016W AIM10P39965 576 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W VMA10P48836 114 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W ECM38Q05902 660 aaPredicted RBP3.61□□□□□ -1.83
SWI1YPL016W DSE3Q08729 430 aa3.61□□□□□ -1.83
SWI1YPL016W GUP2Q08929 609 aa3.61□□□□□ -1.83
SWI1YPL016W YOL107WQ12239 342 aa3.61□□□□□ -1.83
SWI1YPL016W YPR1Q12458 312 aa3.61□□□□□ -1.83
SWI1YPL016W SWI5P08153 709 aa3.61□□□□□ -1.83
SWI1YPL016W FUR1P18562 216 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W SIR1P21691 654 aa3.61□□□□□ -1.83
SWI1YPL016W SGV1P23293 657 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W AAT2P23542 418 aaKnown RBP3.61□□□□□ -1.83
SWI1YPL016W MGT1P26188 188 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms