RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W URB2P47108 1174 aa3.8□□□□□ -1.8
SSU72YNL222W YGL108CP53139 140 aa3.8□□□□□ -1.8
SSU72YNL222W OGG1P53397 376 aaPredicted RBP3.8□□□□□ -1.8
SSU72YNL222W MDG1P53885 366 aa3.8□□□□□ -1.8
SSU72YNL222W TIM10P87108 93 aa3.8□□□□□ -1.8
SSU72YNL222W ESA1Q08649 445 aa3.8□□□□□ -1.8
SSU72YNL222W TMS1Q12116 473 aa3.8□□□□□ -1.8
SSU72YNL222W OCA4P25366 362 aa3.79□□□□□ -1.8
SSU72YNL222W YCR100CP25606 316 aa3.79□□□□□ -1.8
SSU72YNL222W PAD1P33751 242 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SSU72YNL222W GOR1P53839 350 aa3.79□□□□□ -1.8
SSU72YNL222W RPT6Q01939 405 aaKnown RBP3.79□□□□□ -1.8
SSU72YNL222W MRD1Q06106 887 aaKnown RBP3.79□□□□□ -1.8
SSU72YNL222W RRD2Q12461 358 aa3.79□□□□□ -1.8
SSU72YNL222W SEC39Q12745 709 aa3.79□□□□□ -1.8
SSU72YNL222W HHF1P02309 103 aaKnown RBP3.78□□□□□ -1.8
SSU72YNL222W CPR4P25334 318 aa3.78□□□□□ -1.8
SSU72YNL222W CRM1P30822 1084 aaKnown RBP3.78□□□□□ -1.8
SSU72YNL222W CBP4P37267 147 aa3.78□□□□□ -1.8
SSU72YNL222W SPO22P40511 975 aa3.78□□□□□ -1.8
SSU72YNL222W KTR5P53966 522 aaPredicted RBP3.78□□□□□ -1.8
SSU72YNL222W RRN11Q04712 507 aa3.78□□□□□ -1.8
SSU72YNL222W IMH1Q06704 911 aaKnown RBP3.78□□□□□ -1.8
SSU72YNL222W YPL199CQ08954 240 aa3.78□□□□□ -1.8
SSU72YNL222W YAR066WP0CX18 203 aa3.77□□□□□ -1.81
SSU72YNL222W YHR214WP0CX19 203 aa3.77□□□□□ -1.81
SSU72YNL222W SAM1P10659 382 aaKnown RBP3.77□□□□□ -1.81
SSU72YNL222W SAM2P19358 384 aaKnown RBP3.77□□□□□ -1.81
SSU72YNL222W YGR210CP42942 411 aa3.77□□□□□ -1.81
SSU72YNL222W TRS85P46944 698 aa3.77□□□□□ -1.81
SSU72YNL222W TWF1P53250 332 aa3.77□□□□□ -1.81
SSU72YNL222W MRPL35Q06678 367 aa3.77□□□□□ -1.81
SSU72YNL222W IMP2'P32351 346 aa3.76□□□□□ -1.81
SSU72YNL222W SWE1P32944 819 aa3.76□□□□□ -1.81
SSU72YNL222W YCR041WP37265 110 aa3.76□□□□□ -1.81
SSU72YNL222W SWD3P38123 315 aa3.76□□□□□ -1.81
SSU72YNL222W THI2P38141 450 aa3.76□□□□□ -1.81
SSU72YNL222W OST1P41543 476 aaKnown RBP3.76□□□□□ -1.81
SSU72YNL222W BTN2P53286 410 aa3.76□□□□□ -1.81
SSU72YNL222W ODC1Q03028 310 aa3.76□□□□□ -1.81
SSU72YNL222W TAP42Q04372 366 aa3.76□□□□□ -1.81
SSU72YNL222W SOV1Q04748 898 aa3.76□□□□□ -1.81
SSU72YNL222W TSR1Q07381 788 aaKnown RBP3.76□□□□□ -1.81
SSU72YNL222W ATP10P18496 279 aa3.75□□□□□ -1.81
SSU72YNL222W AFG1P32317 509 aa3.75□□□□□ -1.81
SSU72YNL222W FAA2P39518 744 aa3.75□□□□□ -1.81
SSU72YNL222W WWM1P43582 211 aaKnown RBP3.75□□□□□ -1.81
SSU72YNL222W TOF1P53840 1238 aa3.75□□□□□ -1.81
SSU72YNL222W IBD2P53892 351 aa3.75□□□□□ -1.81
SSU72YNL222W PNG1Q02890 363 aa3.75□□□□□ -1.81
SSU72YNL222W PAL1Q05518 499 aaKnown RBP3.75□□□□□ -1.81
SSU72YNL222W ATG29Q12092 213 aa3.75□□□□□ -1.81
SSU72YNL222W ARG3P05150 338 aa3.74□□□□□ -1.81
SSU72YNL222W CLN3P13365 580 aa3.74□□□□□ -1.81
SSU72YNL222W SPB1P25582 841 aaPredicted RBP3.74□□□□□ -1.81
SSU72YNL222W GPI10P30777 616 aa3.74□□□□□ -1.81
SSU72YNL222W PMT1P33775 817 aa3.74□□□□□ -1.81
SSU72YNL222W CMC1P36064 111 aa3.74□□□□□ -1.81
SSU72YNL222W PCP1P53259 346 aa3.74□□□□□ -1.81
SSU72YNL222W TMC1Q08422 150 aaPredicted RBP3.74□□□□□ -1.81
SSU72YNL222W IDH2P28241 369 aaKnown RBP3.73□□□□□ -1.81
SSU72YNL222W ARO2P28777 376 aaKnown RBP3.73□□□□□ -1.81
SSU72YNL222W MIX23P38162 196 aa3.73□□□□□ -1.81
SSU72YNL222W VID24P38263 362 aa3.73□□□□□ -1.81
SSU72YNL222W PTH1P38876 190 aaKnown RBP3.73□□□□□ -1.81
SSU72YNL222W MET18P40469 1032 aa3.73□□□□□ -1.81
SSU72YNL222W HXT14P42833 540 aa3.73□□□□□ -1.81
SSU72YNL222W YGR149WP48236 432 aa3.73□□□□□ -1.81
SSU72YNL222W MRP51Q02950 344 aa3.73□□□□□ -1.81
SSU72YNL222W YDL121CQ07541 149 aa3.73□□□□□ -1.81
SSU72YNL222W RRG7Q08774 242 aaPredicted RBP3.73□□□□□ -1.81
SSU72YNL222W YLR108CQ12259 485 aa3.73□□□□□ -1.81
SSU72YNL222W HRT3Q12347 344 aa3.73□□□□□ -1.81
SSU72YNL222W RHO2P06781 192 aa3.72□□□□□ -1.81
SSU72YNL222W ISY1P21374 235 aaPredicted RBP3.72□□□□□ -1.81
SSU72YNL222W RAD14P28519 371 aa3.72□□□□□ -1.81
SSU72YNL222W SEC66P33754 206 aa3.72□□□□□ -1.81
SSU72YNL222W REE1P40893 198 aa3.72□□□□□ -1.81
SSU72YNL222W NCA3P46955 337 aa3.72□□□□□ -1.81
SSU72YNL222W SDT1P53078 280 aa3.72□□□□□ -1.81
SSU72YNL222W NCS2P53923 493 aaPredicted RBP3.72□□□□□ -1.81
SSU72YNL222W YLR278CQ05854 1341 aa3.71□□□□□ -1.81
SSU72YNL222W ADH2P00331 348 aaKnown RBP3.71□□□□□ -1.82
SSU72YNL222W TOA1P32773 286 aa3.71□□□□□ -1.82
SSU72YNL222W VMA13P41807 478 aaKnown RBP3.71□□□□□ -1.82
SSU72YNL222W YIP1P53039 248 aa3.71□□□□□ -1.82
SSU72YNL222W SUB1P54000 292 aaKnown RBP3.71□□□□□ -1.82
SSU72YNL222W RIM20Q12033 661 aa3.71□□□□□ -1.82
SSU72YNL222W SDH3P33421 198 aa3.7□□□□□ -1.82
SSU72YNL222W STB6P36085 766 aa3.7□□□□□ -1.82
SSU72YNL222W PIM1P36775 1133 aa3.7□□□□□ -1.82
SSU72YNL222W LAM5P43560 674 aa3.7□□□□□ -1.82
SSU72YNL222W TIS11P47977 285 aa3.7□□□□□ -1.82
SSU72YNL222W RMD9P53140 646 aaKnown RBP3.7□□□□□ -1.82
SSU72YNL222W JJJ1P53863 590 aa3.7□□□□□ -1.82
SSU72YNL222W MHR1Q06630 226 aa3.7□□□□□ -1.82
SSU72YNL222W MUM3Q08750 479 aa3.7□□□□□ -1.82
SSU72YNL222W MED1Q12321 566 aa3.7□□□□□ -1.82
SSU72YNL222W HIF1Q12373 385 aa3.7□□□□□ -1.82
SSU72YNL222W CDC60P26637 1090 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms