RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	SSE2	P32590	693 aa	Known RBP	3.12	□□□□□ -1.91
VMA6	YLR447C	SDH3	P33421	198 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	AFG3	P39925	761 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	LSM5	P40089	93 aa	Known RBP	3.12	□□□□□ -1.91
VMA6	YLR447C	DUO1	P53168	247 aa	Known RBP	3.12	□□□□□ -1.91
VMA6	YLR447C	GPI1	P53306	609 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	YGR250C	P53316	781 aa	Known RBP	3.12	□□□□□ -1.91
VMA6	YLR447C	MSC1	Q03104	513 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	HUA2	Q12134	243 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	NCE102	Q12207	173 aa	RIP-Chip data	3.12	□□□□□ -1.91	not detected
VMA6	YLR447C	RTN2	Q12443	393 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	SEC53	P07283	254 aa	Known RBP	3.11	□□□□□ -1.91
VMA6	YLR447C	CLN3	P13365	580 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	ROX1	P25042	368 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	SWD3	P38123	315 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	LYS4	P49367	693 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA6	YLR447C	CIK1	Q01649	594 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	VTI1	Q04338	217 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	SMF3	Q12078	473 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA6	YLR447C	HSP42	Q12329	375 aa		3.11	□□□□□ -1.91
VMA6	YLR447C	SUC2	P00724	532 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	ARD1	P07347	238 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	RPL19A	P0CX82	189 aa	Known RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	RPL19B	P0CX83	189 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	CDC24	P11433	854 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	RVS161	P25343	265 aa	Known RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	OCA4	P25366	362 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	MDL1	P33310	695 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	UBP11	P36026	717 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	RSM22	P36056	628 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	AUR1	P36107	401 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	ARC1	P46672	376 aa	Known RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	APT1	P49435	187 aa	Known RBP	3.1	□□□□□ -1.91
VMA6	YLR447C	VPS75	P53853	264 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	VPS9	P54787	451 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	YBR126W-A	Q8TGU7	68 aa		3.1	□□□□□ -1.91
VMA6	YLR447C	STF1	P01098	86 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	GPI10	P30777	616 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	SHP1	P34223	423 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	NAT2	P37293	288 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	SEC28	P40509	296 aa	Known RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	SPO22	P40511	975 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	ALK1	P43633	760 aa	Known RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	MRX6	P48564	524 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	OCA1	P50946	238 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	YSA1	Q01976	231 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	YDR131C	Q03899	556 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	RAD30	Q04049	632 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	RRP9	Q06506	573 aa	Known RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	LUC7	Q07508	261 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	CTI6	Q08923	506 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	RCN2	Q12044	265 aa		3.09	□□□□□ -1.91
VMA6	YLR447C	PAR32	Q12515	295 aa	Known RBP	3.09	□□□□□ -1.91
VMA6	YLR447C	VMA2	P16140	517 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	TRX1	P22217	103 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	MNE1	P24720	663 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	CPR4	P25334	318 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YIH1	P25637	258 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	PEP3	P27801	918 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YBL029W	P38201	376 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	GDI1	P39958	451 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	REE1	P40893	198 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	LCB2	P40970	561 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	SIP4	P46954	829 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YJL055W	P47044	245 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	DRN1	P53255	507 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	SHY1	P53266	389 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	OGG1	P53397	376 aa	Predicted RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	PEX25	Q02969	394 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YMR027W	Q04371	470 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	AIM32	Q04689	311 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YLR345W	Q06137	509 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	TSR1	Q07381	788 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	THP1	Q08231	455 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	YLR108C	Q12259	485 aa		3.08	□□□□□ -1.92
VMA6	YLR447C	NOP58	Q12499	511 aa	Known RBP	3.08	□□□□□ -1.92
VMA6	YLR447C	CRM1	P30822	1084 aa	Known RBP	3.07	□□□□□ -1.92
VMA6	YLR447C	NDI1	P32340	513 aa		3.07	□□□□□ -1.92
VMA6	YLR447C	BNA4	P38169	460 aa		3.07	□□□□□ -1.92
VMA6	YLR447C	FLC2	P39719	783 aa		3.07	□□□□□ -1.92
VMA6	YLR447C	ART5	P53244	586 aa	Known RBP	3.07	□□□□□ -1.92
VMA6	YLR447C	TOF2	Q02208	771 aa		3.07	□□□□□ -1.92
VMA6	YLR447C	NGL3	Q03210	505 aa		3.07	□□□□□ -1.92
VMA6	YLR447C	RBS1	Q05672	457 aa	Known RBP	3.07	□□□□□ -1.92
VMA6	YLR447C	CUE5	Q08412	411 aa	Known RBP	3.07	□□□□□ -1.92
VMA6	YLR447C	FMP40	Q08968	688 aa	Predicted RBP	3.07	□□□□□ -1.92
VMA6	YLR447C	YRF1-4	O13559	1382 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	ADH2	P00331	348 aa	Known RBP	3.06	□□□□□ -1.92
VMA6	YLR447C	PEP4	P07267	405 aa	Known RBP	3.06	□□□□□ -1.92
VMA6	YLR447C	CBS1	P14066	229 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	GLK1	P17709	500 aa	Known RBP	3.06	□□□□□ -1.92
VMA6	YLR447C	ART10	P18634	518 aa	Known RBP	3.06	□□□□□ -1.92
VMA6	YLR447C	YCK1	P23291	538 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	CLB3	P24870	427 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	ADK2	P26364	225 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	PUP2	P32379	260 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	STB6	P36085	766 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	APE3	P37302	537 aa	Known RBP	3.06	□□□□□ -1.92
VMA6	YLR447C	DUG2	P38149	878 aa		3.06	□□□□□ -1.92
VMA6	YLR447C	SSU1	P41930	458 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms