RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YBR259WP38338 688 aa8.83□□□□□ -1
SFP1YLR403W LCP5P40079 357 aaPredicted RBP8.83□□□□□ -1
SFP1YLR403W NUP82P40368 713 aa8.83□□□□□ -1
SFP1YLR403W MPS3P47069 682 aa8.83□□□□□ -1
SFP1YLR403W NRD1P53617 575 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
SFP1YLR403W YLR326WQ06170 240 aaKnown RBP8.83□□□□□ -1
SFP1YLR403W TFC6Q06339 672 aa8.83□□□□□ -1
SFP1YLR403W MSL5Q12186 476 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
SFP1YLR403W RRD2Q12461 358 aa8.83□□□□□ -1
SFP1YLR403W PCD1Q12524 340 aa8.83□□□□□ -1
SFP1YLR403W VMR1P38735 1592 aa8.82□□□□□ -1
SFP1YLR403W CDC28P00546 298 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W FUM1P08417 488 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W MAS2P11914 482 aa8.82□□□□□ -1
SFP1YLR403W SPO16P17122 198 aa8.82□□□□□ -1
SFP1YLR403W BEM1P29366 551 aa8.82□□□□□ -1
SFP1YLR403W SHP1P34223 423 aa8.82□□□□□ -1
SFP1YLR403W FMO1P38866 432 aa8.82□□□□□ -1
SFP1YLR403W STT3P39007 718 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W NPR2P39923 615 aa8.82□□□□□ -1
SFP1YLR403W CFD1P40558 293 aa8.82□□□□□ -1
SFP1YLR403W IRC18P47056 224 aa8.82□□□□□ -1
SFP1YLR403W IMA1P53051 589 aa8.82□□□□□ -1
SFP1YLR403W SLD3P53135 668 aa8.82□□□□□ -1
SFP1YLR403W MET14Q02196 202 aa8.82□□□□□ -1
SFP1YLR403W YDR248CQ03786 193 aa8.82□□□□□ -1
SFP1YLR403W YLR407WQ06070 228 aa8.82□□□□□ -1
SFP1YLR403W DCP1Q12517 231 aaPredicted RBP8.82□□□□□ -1
SFP1YLR403W Q0144Q9ZZW2 109 aa8.82□□□□□ -1
SFP1YLR403W FBA1P14540 359 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W CDC42P19073 191 aa8.82□□□□□ -1
SFP1YLR403W MRPL44P19956 98 aa8.82□□□□□ -1
SFP1YLR403W AIM3P38266 947 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W SHG1P38337 142 aa8.82□□□□□ -1
SFP1YLR403W EGD2P38879 174 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W STL1P39932 569 aa8.82□□□□□ -1
SFP1YLR403W SCC4P40090 624 aa8.82□□□□□ -1
SFP1YLR403W NMA2P53204 395 aa8.82□□□□□ -1
SFP1YLR403W HXT15P54854 567 aa8.82□□□□□ -1
SFP1YLR403W YDC1Q02896 317 aa8.82□□□□□ -1
SFP1YLR403W PRM15Q03262 622 aa8.82□□□□□ -1
SFP1YLR403W GAL83Q04739 417 aa8.82□□□□□ -1
SFP1YLR403W YMR226CQ05016 267 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W TDA5Q06417 326 aaKnown RBP8.82□□□□□ -1
SFP1YLR403W YPR1Q12458 312 aa8.82□□□□□ -1
SFP1YLR403W RPP2AP05319 106 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W RPL22AP05749 121 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W RPL3P14126 387 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W PHO81P17442 1178 aa8.81□□□□□ -1
SFP1YLR403W EXO70P19658 623 aa8.81□□□□□ -1
SFP1YLR403W ARO7P32178 256 aa8.81□□□□□ -1
SFP1YLR403W THI4P32318 326 aa8.81□□□□□ -1
SFP1YLR403W HYM1P32464 399 aa8.81□□□□□ -1
SFP1YLR403W COS8P38723 381 aa8.81□□□□□ -1
SFP1YLR403W DUN1P39009 513 aa8.81□□□□□ -1
SFP1YLR403W LSM4P40070 187 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W THI6P41835 540 aa8.81□□□□□ -1
SFP1YLR403W PFA3P42836 336 aa8.81□□□□□ -1
SFP1YLR403W MNN5P46982 586 aa8.81□□□□□ -1
SFP1YLR403W MRK1P50873 501 aa8.81□□□□□ -1
SFP1YLR403W LCL3P53153 274 aa8.81□□□□□ -1
SFP1YLR403W NOG2P53742 486 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W STP1Q00947 519 aa8.81□□□□□ -1
SFP1YLR403W YPL107WQ02873 248 aa8.81□□□□□ -1
SFP1YLR403W TPP1Q03796 238 aa8.81□□□□□ -1
SFP1YLR403W TMA10Q06177 86 aa8.81□□□□□ -1
SFP1YLR403W REX4Q08237 289 aa8.81□□□□□ -1
SFP1YLR403W RSB1Q08417 382 aa8.81□□□□□ -1
SFP1YLR403W LEU9Q12166 604 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W MED1Q12321 566 aa8.81□□□□□ -1
SFP1YLR403W MTR10Q99189 972 aa8.81□□□□□ -1
SFP1YLR403W ISN1Q99312 450 aa8.81□□□□□ -1
SFP1YLR403W BCK1Q01389 1478 aa8.81□□□□□ -1
SFP1YLR403W CDC36P06100 191 aaPredicted RBP8.81□□□□□ -1
SFP1YLR403W MTF1P14908 341 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W MAP2P38174 421 aaKnown RBP8.81□□□□□ -1
SFP1YLR403W SOP4P39543 234 aaPredicted RBP8.81□□□□□ -1
SFP1YLR403W UBC12P52491 188 aa8.81□□□□□ -1
SFP1YLR403W RRN9P53437 365 aa8.81□□□□□ -1
SFP1YLR403W HCH1P53834 153 aa8.81□□□□□ -1
SFP1YLR403W PIN2Q12057 282 aa8.81□□□□□ -1
SFP1YLR403W TY1A-DR3Q12441 440 aa8.81□□□□□ -1
SFP1YLR403W HOP1P20050 605 aa8.8□□□□□ -1
SFP1YLR403W RFA1P22336 621 aaKnown RBP8.8□□□□□ -1
SFP1YLR403W RNA14P25298 677 aaKnown RBP8.8□□□□□ -1
SFP1YLR403W GPT2P36148 743 aa8.8□□□□□ -1
SFP1YLR403W YEL025CP39991 1188 aa8.8□□□□□ -1
SFP1YLR403W HXT9P40885 567 aa8.8□□□□□ -1
SFP1YLR403W YJR030CP47101 745 aa8.8□□□□□ -1
SFP1YLR403W TNA1P53322 534 aa8.8□□□□□ -1
SFP1YLR403W ARK1P53974 638 aa8.8□□□□□ -1
SFP1YLR403W PEX25Q02969 394 aa8.8□□□□□ -1
SFP1YLR403W ATX2Q12067 313 aa8.8□□□□□ -1
SFP1YLR403W NSL1Q12143 216 aa8.8□□□□□ -1
SFP1YLR403W BAR1P12630 587 aa8.79□□□□□ -1
SFP1YLR403W SNF4P12904 322 aa8.79□□□□□ -1
SFP1YLR403W DEG1P31115 442 aaKnown RBP8.79□□□□□ -1
SFP1YLR403W COQ2P32378 372 aa8.79□□□□□ -1
SFP1YLR403W PTM1P32857 523 aa8.79□□□□□ -1
SFP1YLR403W MRX6P48564 524 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms