RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C GSH2Q08220 491 aa5.66□□□□□ -1.5
SSK1YLR006C NMD4Q12129 218 aa5.66□□□□□ -1.5
SSK1YLR006C YPR071WQ12346 211 aa5.66□□□□□ -1.5
SSK1YLR006C HRT3Q12347 344 aa5.66□□□□□ -1.5
SSK1YLR006C SWI5P08153 709 aa5.66□□□□□ -1.5
SSK1YLR006C WHI2P12611 486 aa5.66□□□□□ -1.5
SSK1YLR006C ABF1P14164 731 aa5.66□□□□□ -1.5
SSK1YLR006C SEC63P14906 663 aa5.66□□□□□ -1.5
SSK1YLR006C ADY2P25613 283 aa5.66□□□□□ -1.5
SSK1YLR006C HOG1P32485 435 aa5.66□□□□□ -1.5
SSK1YLR006C FRE1P32791 686 aa5.66□□□□□ -1.5
SSK1YLR006C ASK1P35734 292 aa5.66□□□□□ -1.5
SSK1YLR006C DBP7P36120 742 aaKnown RBP5.66□□□□□ -1.5
SSK1YLR006C YMC2P38087 329 aa5.66□□□□□ -1.5
SSK1YLR006C AGP2P38090 596 aa5.66□□□□□ -1.5
SSK1YLR006C POP7P38291 140 aa5.66□□□□□ -1.5
SSK1YLR006C WSS1P38838 269 aa5.66□□□□□ -1.5
SSK1YLR006C PNT1P38969 423 aa5.66□□□□□ -1.5
SSK1YLR006C FMP32P43557 207 aa5.66□□□□□ -1.5
SSK1YLR006C RRT5P43607 289 aa5.66□□□□□ -1.5
SSK1YLR006C YGL108CP53139 140 aa5.66□□□□□ -1.5
SSK1YLR006C PNC1P53184 216 aaKnown RBP5.66□□□□□ -1.5
SSK1YLR006C BSC5P53755 489 aa5.66□□□□□ -1.5
SSK1YLR006C YLL007CQ07799 665 aa5.66□□□□□ -1.5
SSK1YLR006C ENT4Q07872 247 aa5.66□□□□□ -1.5
SSK1YLR006C ATG11Q12527 1178 aa5.66□□□□□ -1.5
SSK1YLR006C YMR030W-AQ3E760 96 aa5.66□□□□□ -1.5
SSK1YLR006C CBP2P03874 630 aaPredicted RBP5.65□□□□□ -1.5
SSK1YLR006C ERG20P08524 352 aaKnown RBP5.65□□□□□ -1.5
SSK1YLR006C RPL35AP0CX84 120 aaKnown RBP5.65□□□□□ -1.5
SSK1YLR006C RPL35BP0CX85 120 aaKnown RBP5.65□□□□□ -1.5
SSK1YLR006C ATR1P13090 542 aa5.65□□□□□ -1.5
SSK1YLR006C SEC62P21825 274 aa5.65□□□□□ -1.5
SSK1YLR006C CHL1P22516 861 aaPredicted RBP5.65□□□□□ -1.5
SSK1YLR006C PHO3P24031 467 aa5.65□□□□□ -1.5
SSK1YLR006C TFC1P32367 649 aa5.65□□□□□ -1.5
SSK1YLR006C CTP1P38152 299 aa5.65□□□□□ -1.5
SSK1YLR006C MNN9P39107 395 aaKnown RBP5.65□□□□□ -1.5
SSK1YLR006C PRM2P40534 656 aa5.65□□□□□ -1.5
SSK1YLR006C CUS2P53830 285 aaPredicted RBP5.65□□□□□ -1.5
SSK1YLR006C TMA20P89886 181 aaPredicted RBP5.65□□□□□ -1.5
SSK1YLR006C AGE1Q04412 482 aa5.65□□□□□ -1.5
SSK1YLR006C ADE4P04046 510 aaKnown RBP5.65□□□□□ -1.51
SSK1YLR006C RHO2P06781 192 aa5.65□□□□□ -1.51
SSK1YLR006C CHS1P08004 1131 aa5.65□□□□□ -1.51
SSK1YLR006C YPK1P12688 680 aaKnown RBP5.65□□□□□ -1.51
SSK1YLR006C ACO1P19414 778 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SSK1YLR006C UTR1P21373 530 aa5.65□□□□□ -1.51
SSK1YLR006C DPB2P24482 689 aaPredicted RBP5.65□□□□□ -1.51
SSK1YLR006C HRR25P29295 494 aaKnown RBP5.65□□□□□ -1.51
SSK1YLR006C CSE1P33307 960 aa5.65□□□□□ -1.51
SSK1YLR006C YKL070WP36087 169 aa5.65□□□□□ -1.51
SSK1YLR006C GIP1P38229 639 aa5.65□□□□□ -1.51
SSK1YLR006C TAE1P38340 232 aa5.65□□□□□ -1.51
SSK1YLR006C VNX1P42839 908 aa5.65□□□□□ -1.51
SSK1YLR006C RFX1P48743 811 aa5.65□□□□□ -1.51
SSK1YLR006C PSP1P50896 841 aaKnown RBP5.65□□□□□ -1.51
SSK1YLR006C CSN9Q03981 162 aa5.65□□□□□ -1.51
SSK1YLR006C ROY1Q04847 553 aa5.65□□□□□ -1.51
SSK1YLR006C SDO1Q07953 250 aaKnown RBP5.65□□□□□ -1.51
SSK1YLR006C YOR238WQ08634 303 aa5.65□□□□□ -1.51
SSK1YLR006C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SSK1YLR006C MED4Q12343 284 aa5.65□□□□□ -1.51
SSK1YLR006C STE2D6VTK4 431 aa5.64□□□□□ -1.51
SSK1YLR006C ATP2P00830 511 aaKnown RBP5.64□□□□□ -1.51
SSK1YLR006C BET2P20133 325 aa5.64□□□□□ -1.51
SSK1YLR006C RVS161P25343 265 aaKnown RBP5.64□□□□□ -1.51
SSK1YLR006C GCD11P32481 527 aaKnown RBP5.64□□□□□ -1.51
SSK1YLR006C GDA1P32621 518 aa5.64□□□□□ -1.51
SSK1YLR006C AIM26P32858 118 aa5.64□□□□□ -1.51
SSK1YLR006C PTC1P35182 281 aa5.64□□□□□ -1.51
SSK1YLR006C PEX28P38848 579 aa5.64□□□□□ -1.51
SSK1YLR006C AIM18P38884 321 aa5.64□□□□□ -1.51
SSK1YLR006C PET100P38958 111 aa5.64□□□□□ -1.51
SSK1YLR006C NUP60P39705 539 aa5.64□□□□□ -1.51
SSK1YLR006C ELP2P42935 788 aa5.64□□□□□ -1.51
SSK1YLR006C YGL176CP46945 554 aa5.64□□□□□ -1.51
SSK1YLR006C AIF1P52923 378 aa5.64□□□□□ -1.51
SSK1YLR006C YPR003CP53394 754 aa5.64□□□□□ -1.51
SSK1YLR006C PET117Q02771 107 aa5.64□□□□□ -1.51
SSK1YLR006C GTO3Q04806 366 aa5.64□□□□□ -1.51
SSK1YLR006C CDC123Q05791 360 aa5.64□□□□□ -1.51
SSK1YLR006C YEH2Q07950 538 aa5.64□□□□□ -1.51
SSK1YLR006C GET4Q12125 312 aa5.64□□□□□ -1.51
SSK1YLR006C NTO1Q12311 748 aa5.64□□□□□ -1.51
SSK1YLR006C YLR278CQ05854 1341 aa5.64□□□□□ -1.51
SSK1YLR006C CAR1P00812 333 aaKnown RBP5.63□□□□□ -1.51
SSK1YLR006C RPP2BP02400 110 aaKnown RBP5.63□□□□□ -1.51
SSK1YLR006C COX4P04037 155 aa5.63□□□□□ -1.51
SSK1YLR006C MAS2P11914 482 aa5.63□□□□□ -1.51
SSK1YLR006C GLN4P13188 809 aaKnown RBP5.63□□□□□ -1.51
SSK1YLR006C GCY1P14065 312 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SSK1YLR006C CBS1P14066 229 aa5.63□□□□□ -1.51
SSK1YLR006C RAM1P22007 431 aa5.63□□□□□ -1.51
SSK1YLR006C URE2P23202 354 aaKnown RBP5.63□□□□□ -1.51
SSK1YLR006C ERG6P25087 383 aaKnown RBP5.63□□□□□ -1.51
SSK1YLR006C VMA3P25515 160 aa5.63□□□□□ -1.51
SSK1YLR006C YUR1P26725 428 aa5.63□□□□□ -1.51
SSK1YLR006C FLR1P38124 548 aa5.63□□□□□ -1.51
SSK1YLR006C ATG12P38316 186 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms