RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	RIM13	Q03792	727 aa		4.92	□□□□□ -1.62
SKI8	YGL213C	PPM1	Q04081	328 aa		4.92	□□□□□ -1.62
SKI8	YGL213C	PHO92	Q06390	306 aa		4.92	□□□□□ -1.62
SKI8	YGL213C	KEL3	Q08979	651 aa	Predicted RBP	4.92	□□□□□ -1.62
SKI8	YGL213C	HER1	Q12276	1246 aa		4.92	□□□□□ -1.62
SKI8	YGL213C	PHO84	P25297	587 aa	Known RBP	4.91	□□□□□ -1.62
SKI8	YGL213C	PRP21	P32524	280 aa	Predicted RBP	4.91	□□□□□ -1.62
SKI8	YGL213C	SMI1	P32566	505 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	UTR4	P32626	227 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	YER130C	P39959	443 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	VHS2	P40463	436 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	XBP1	P40489	647 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	MLC1	P53141	149 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	YGL082W	P53155	381 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	YDR061W	Q12298	539 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	YNL162W-A	Q3E7A8	72 aa		4.91	□□□□□ -1.62
SKI8	YGL213C	CAR1	P00812	333 aa	Known RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	STF1	P01098	86 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	RPL42A	P0CX27	106 aa	Known RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	RPL42B	P0CX28	106 aa	Known RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	VMA2	P16140	517 aa	Known RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	GLK1	P17709	500 aa	Known RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	GDT1	P38301	280 aa	Predicted RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	TOM22	P49334	152 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	TOF1	P53840	1238 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	DSL1	P53847	754 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	SEC5	P89102	971 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	SLD5	Q03406	294 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	HSP31	Q04432	237 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	THI7	Q05998	598 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	NRT1	Q08485	598 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	RKM1	Q08961	583 aa	Predicted RBP	4.9	□□□□□ -1.63
SKI8	YGL213C	RRD2	Q12461	358 aa		4.9	□□□□□ -1.63
SKI8	YGL213C	PMR1	P13586	950 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	MGR1	P25573	417 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SKI8	YGL213C	RIM1	P32445	135 aa	Known RBP	4.89	□□□□□ -1.63
SKI8	YGL213C	VPS17	P32913	551 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	RRP1	P35178	278 aa	Predicted RBP	4.89	□□□□□ -1.63
SKI8	YGL213C	YNK1	P36010	153 aa	Known RBP	4.89	□□□□□ -1.63
SKI8	YGL213C	CUE2	P36075	443 aa	Known RBP	4.89	□□□□□ -1.63
SKI8	YGL213C	EFM2	P38347	419 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	YTA12	P40341	825 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	EPL1	P43572	832 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SKI8	YGL213C	YIF1	P53845	314 aa	Known RBP	4.89	□□□□□ -1.63
SKI8	YGL213C	MSS11	Q03825	758 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	COQ11	Q05892	277 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	MDM30	Q05930	598 aa		4.89	□□□□□ -1.63
SKI8	YGL213C	CYB2	P00175	591 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	SCEI	P03882	235 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	ARO3	P14843	370 aa	Known RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	YCR007C	P25354	239 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	PPZ1	P26570	692 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	ASC1	P38011	319 aa	Known RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	RRN10	P38204	145 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	PFF1	P38244	976 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	YSW1	P38280	609 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	RRP3	P38712	501 aa	Known RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	OSH3	P38713	996 aa	Known RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	CCT2	P39076	527 aa	Known RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	ATF1	P40353	525 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	YIR016W	P40572	265 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	SAS2	P40963	338 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	YJR011C	P47086	261 aa	Predicted RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	ESBP6	P53918	673 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	SAM50	P53969	484 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	YDR415C	Q04033	374 aa	Predicted RBP	4.88	□□□□□ -1.63
SKI8	YGL213C	YDR387C	Q04162	555 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	BSC1	Q12140	328 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	NDJ1	Q12366	352 aa		4.88	□□□□□ -1.63
SKI8	YGL213C	YER190C-B	P0CX94	160 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	YEL077W-A	P0CX95	160 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	YGR296C-B	P0CX96	160 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	YPL283W-B	P0CX97	160 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	YPR204C-A	P0CX98	160 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	SEC63	P14906	663 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	EXO70	P19658	623 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	SEC62	P21825	274 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	RPI1	P23250	407 aa	Known RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	GEX1	P25596	615 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	ACH1	P32316	526 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	APE2	P32454	952 aa	Known RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	SOR1	P35497	357 aa	Known RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	MIC60	P36112	540 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	SIF2	P38262	535 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	RFC3	P38629	340 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	PCL6	P40038	420 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	FAU1	P40099	211 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	CSM2	P40465	213 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	PIB2	P53191	635 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	TDA7	P53882	636 aa	Predicted RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	RPL15B	P54780	204 aa	Predicted RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	MRPL1	Q04599	285 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	SOR2	Q07786	357 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	THI20	Q08224	551 aa		4.87	□□□□□ -1.63
SKI8	YGL213C	LSP1	Q12230	341 aa	Known RBP	4.87	□□□□□ -1.63
SKI8	YGL213C	HNM1	P19807	563 aa		4.86	□□□□□ -1.63
SKI8	YGL213C	AIM17	P23180	465 aa	Known RBP	4.86	□□□□□ -1.63
SKI8	YGL213C	SPC34	P36131	295 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms