RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	COS10	P52924	374 aa		2.03	□□□□□ -2.08
DOT6	YER088C	DUG3	P53871	357 aa		2.03	□□□□□ -2.08
DOT6	YER088C	TOF2	Q02208	771 aa		2.03	□□□□□ -2.08
DOT6	YER088C	SLD5	Q03406	294 aa		2.03	□□□□□ -2.08
DOT6	YER088C	TAP42	Q04372	366 aa		2.03	□□□□□ -2.08
DOT6	YER088C	VPS38	Q05919	439 aa		2.03	□□□□□ -2.08
DOT6	YER088C	SYO1	Q07395	620 aa		2.03	□□□□□ -2.08
DOT6	YER088C	YBR298C-A	Q8TGK4	73 aa		2.03	□□□□□ -2.08
DOT6	YER088C	TAO3	P40468	2376 aa		2.02	□□□□□ -2.09
DOT6	YER088C	TOM1	Q03280	3268 aa		2.02	□□□□□ -2.09
DOT6	YER088C	GCN4	P03069	281 aa		2.02	□□□□□ -2.09
DOT6	YER088C	GAL80	P04387	435 aa		2.02	□□□□□ -2.09
DOT6	YER088C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.02	□□□□□ -2.09	not detected
DOT6	YER088C	YML002W	P0CF17	737 aa		2.02	□□□□□ -2.09
DOT6	YER088C	PRP16	P15938	1071 aa	Predicted RBP	2.02	□□□□□ -2.09
DOT6	YER088C	PDA1	P16387	420 aa	Known RBP	2.02	□□□□□ -2.09
DOT6	YER088C	UTR4	P32626	227 aa		2.02	□□□□□ -2.09
DOT6	YER088C	MSN2	P33748	704 aa		2.02	□□□□□ -2.09
DOT6	YER088C	DUG2	P38149	878 aa		2.02	□□□□□ -2.09
DOT6	YER088C	MSR1	P38714	643 aa		2.02	□□□□□ -2.09
DOT6	YER088C	KRE9	P39005	276 aa		2.02	□□□□□ -2.09
DOT6	YER088C	SPO22	P40511	975 aa		2.02	□□□□□ -2.09
DOT6	YER088C	RPR2	P40571	144 aa		2.02	□□□□□ -2.09
DOT6	YER088C	IKS1	P47042	667 aa		2.02	□□□□□ -2.09
DOT6	YER088C	YGL260W	P53056	76 aa		2.02	□□□□□ -2.09
DOT6	YER088C	YGR066C	P53242	292 aa		2.02	□□□□□ -2.09
DOT6	YER088C	HEF3	P53978	1044 aa	Known RBP	2.02	□□□□□ -2.09
DOT6	YER088C	RLI1	Q03195	608 aa	Known RBP	2.02	□□□□□ -2.09
DOT6	YER088C	MFB1	Q04922	465 aa		2.02	□□□□□ -2.09
DOT6	YER088C	ERP1	Q05359	219 aa	Known RBP	2.02	□□□□□ -2.09
DOT6	YER088C	CDC45	Q08032	650 aa		2.02	□□□□□ -2.09
DOT6	YER088C	RRD2	Q12461	358 aa		2.02	□□□□□ -2.09
DOT6	YER088C	AVL9	Q12500	764 aa		2.02	□□□□□ -2.09
DOT6	YER088C	LYS2	P07702	1392 aa		2.02	□□□□□ -2.09
DOT6	YER088C	YCR007C	P25354	239 aa		2.01	□□□□□ -2.09
DOT6	YER088C	BUD14	P27637	709 aa		2.01	□□□□□ -2.09
DOT6	YER088C	AFG3	P39925	761 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YJL068C	P40363	299 aa		2.01	□□□□□ -2.09
DOT6	YER088C	ESL1	P40456	1118 aa		2.01	□□□□□ -2.09
DOT6	YER088C	VMA13	P41807	478 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	IRC6	P43615	237 aa		2.01	□□□□□ -2.09
DOT6	YER088C	ROK1	P45818	564 aa	Predicted RBP	2.01	□□□□□ -2.09
DOT6	YER088C	RTT101	P47050	842 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YDL186W	P48568	277 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YGR117C	P53270	476 aa		2.01	□□□□□ -2.09
DOT6	YER088C	JJJ1	P53863	590 aa		2.01	□□□□□ -2.09
DOT6	YER088C	MRD1	Q06106	887 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	KEL3	Q08979	651 aa	Predicted RBP	2.01	□□□□□ -2.09
DOT6	YER088C	SEC62	P21825	274 aa		2.01	□□□□□ -2.09
DOT6	YER088C	SEC66	P33754	206 aa		2.01	□□□□□ -2.09
DOT6	YER088C	SHP1	P34223	423 aa		2.01	□□□□□ -2.09
DOT6	YER088C	APE3	P37302	537 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	CCT4	P39078	528 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	MBB1	P39534	108 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YFR016C	P43597	1233 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	ALK1	P43633	760 aa	Known RBP	2.01	□□□□□ -2.09
DOT6	YER088C	PET130	P47065	347 aa		2.01	□□□□□ -2.09
DOT6	YER088C	GLO2	Q05584	274 aa		2.01	□□□□□ -2.09
DOT6	YER088C	THP1	Q08231	455 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YDL009C	Q12210	107 aa		2.01	□□□□□ -2.09
DOT6	YER088C	RKM5	Q12367	367 aa		2.01	□□□□□ -2.09
DOT6	YER088C	YDL007C-A	Q2V2Q0	85 aa		2.01	□□□□□ -2.09
DOT6	YER088C	AUS1	Q08409	1394 aa		2.01	□□□□□ -2.09
DOT6	YER088C	SSK22	P25390	1331 aa	Predicted RBP	2.01	□□□□□ -2.09
DOT6	YER088C	SUI2	P20459	304 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	RNA14	P25298	677 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	OCA4	P25366	362 aa		2	□□□□□ -2.09
DOT6	YER088C	NDC1	P32500	655 aa		2	□□□□□ -2.09
DOT6	YER088C	FRE1	P32791	686 aa		2	□□□□□ -2.09
DOT6	YER088C	RGT1	P32862	1170 aa		2	□□□□□ -2.09
DOT6	YER088C	BNA4	P38169	460 aa		2	□□□□□ -2.09
DOT6	YER088C	CST26	P38226	397 aa		2	□□□□□ -2.09
DOT6	YER088C	REG2	P38232	338 aa		2	□□□□□ -2.09
DOT6	YER088C	MET18	P40469	1032 aa		2	□□□□□ -2.09
DOT6	YER088C	CRZ1	P53968	678 aa		2	□□□□□ -2.09
DOT6	YER088C	RMT2	Q03305	412 aa		2	□□□□□ -2.09
DOT6	YER088C	RBS1	Q05672	457 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	PHO92	Q06390	306 aa		2	□□□□□ -2.09
DOT6	YER088C	CFT2	Q12102	859 aa	Predicted RBP	2	□□□□□ -2.09
DOT6	YER088C	AYT1	Q12226	474 aa		2	□□□□□ -2.09
DOT6	YER088C	PGA3	Q12746	312 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	ARG3	P05150	338 aa		2	□□□□□ -2.09
DOT6	YER088C	HEM2	P05373	342 aa		2	□□□□□ -2.09
DOT6	YER088C	COR1	P07256	457 aa		2	□□□□□ -2.09
DOT6	YER088C	PEP3	P27801	918 aa		2	□□□□□ -2.09
DOT6	YER088C	SPC110	P32380	944 aa		2	□□□□□ -2.09
DOT6	YER088C	ATP11	P32453	318 aa		2	□□□□□ -2.09
DOT6	YER088C	MTC4	P38335	694 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	RPH1	P39956	796 aa		2	□□□□□ -2.09
DOT6	YER088C	HAT2	P39984	401 aa		2	□□□□□ -2.09
DOT6	YER088C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2	□□□□□ -2.09	not detected
DOT6	YER088C	RBG2	P53295	368 aa	Known RBP	2	□□□□□ -2.09
DOT6	YER088C	KTR5	P53966	522 aa	Predicted RBP	2	□□□□□ -2.09
DOT6	YER088C	ARK1	P53974	638 aa		2	□□□□□ -2.09
DOT6	YER088C	SYF1	Q04048	859 aa	Predicted RBP	2	□□□□□ -2.09
DOT6	YER088C	TAF11	Q04226	346 aa		2	□□□□□ -2.09
DOT6	YER088C	SEC39	Q12745	709 aa		2	□□□□□ -2.09
DOT6	YER088C	FOB1	O13329	566 aa		1.99	□□□□□ -2.09
DOT6	YER088C	GLK1	P17709	500 aa	Known RBP	1.99	□□□□□ -2.09
DOT6	YER088C	MDM31	P38880	579 aa		1.99	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms