RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 POLR3EQ9NVU0 708 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 COL20A1Q9P218 1284 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
SRRT-219ENST00000641476 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 ARIH2O95376 493 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 MYL3P08590 195 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 CYP21A2P08686 494 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 ACTN1P12814 892 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
SRRT-219ENST00000641476 COPS5Q92905 334 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 MAF1Q9H063 256 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
SRRT-219ENST00000641476 B4DLN1 442 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 GPR37L1O60883 481 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 MRPL12P52815 198 aaKnown RBP17.01■□□□□ 0.31
SRRT-219ENST00000641476 TAP1Q03518 808 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 TRDNQ13061 729 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 MCF2L2Q86YR7 1114 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 SLC9A7Q96T83 725 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
SRRT-219ENST00000641476 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
SRRT-219ENST00000641476 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
SRRT-219ENST00000641476 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
SRRT-219ENST00000641476 PRRC2BQ5JSZ5 2229 aaKnown RBP17■□□□□ 0.31
SRRT-219ENST00000641476 TRANK1O15050 2925 aa17■□□□□ 0.31
SRRT-219ENST00000641476 SGSM2O43147 1006 aa17■□□□□ 0.31
SRRT-219ENST00000641476 TXNP10599 105 aaKnown RBP17■□□□□ 0.31
SRRT-219ENST00000641476 GRB10Q13322 594 aa17■□□□□ 0.31
SRRT-219ENST00000641476 BRDTQ58F21 947 aaPredicted RBP17■□□□□ 0.31
SRRT-219ENST00000641476 ALYREFQ86V81 257 aaKnown RBP17■□□□□ 0.31
SRRT-219ENST00000641476 MTMR8Q96EF0 704 aa17■□□□□ 0.31
SRRT-219ENST00000641476 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
SRRT-219ENST00000641476 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
SRRT-219ENST00000641476 A6NJR5 290 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 OPLAHO14841 1288 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
SRRT-219ENST00000641476 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
SRRT-219ENST00000641476 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 GRM4Q14833 912 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 CCDC62Q6P9F0 684 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 SPRED2Q7Z698 418 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 RALYLQ86SE5 291 aaKnown RBP16.99■□□□□ 0.31
SRRT-219ENST00000641476 HERC6Q8IVU3 1022 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 NSUN6Q8TEA1 469 aaKnown RBP16.99■□□□□ 0.31
SRRT-219ENST00000641476 RMDN3Q96TC7 470 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
SRRT-219ENST00000641476 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
SRRT-219ENST00000641476 SCN5AQ14524 2016 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
SRRT-219ENST00000641476 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 E7EWF7 191 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 CFBP00751 764 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 EIF2AK2P19525 551 aaKnown RBP16.98■□□□□ 0.31
SRRT-219ENST00000641476 HSD17B4P51659 736 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 GHRHRQ02643 423 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 FAM47CQ5HY64 1035 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 PHOSPHO2Q8TCD6 241 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
SRRT-219ENST00000641476 SENP2Q9HC62 589 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 CD320Q9NPF0 282 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 PXMP2Q9NR77 195 aa16.98■□□□□ 0.31
SRRT-219ENST00000641476 IFIT3O14879 490 aaKnown RBP16.97■□□□□ 0.31
SRRT-219ENST00000641476 ZBTB5O15062 677 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 LPXNO60711 386 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 WTAPQ15007 396 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 ARHGEF16Q5VV41 709 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 HOMER1Q86YM7 354 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 IWS1Q96ST2 819 aa16.97■□□□□ 0.31
SRRT-219ENST00000641476 ERICH2A1L162 156 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 PI4K2BG5E9Z4 385 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 KPNA6O60684 536 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 GH1P01241 217 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 MMP3P08254 477 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 RFC2P35250 354 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 ANTXR2P58335 489 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 SART3Q15020 963 aaKnown RBP16.96■□□□□ 0.31
SRRT-219ENST00000641476 STXBP2Q15833 593 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 LY6KQ17RY6 165 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 NFRKBQ6P4R8 1299 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 MB21D2Q8IYB1 491 aaPredicted RBP16.96■□□□□ 0.31
SRRT-219ENST00000641476 GDPD5Q8WTR4 605 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
SRRT-219ENST00000641476 RBM8AQ9Y5S9 174 aaKnown RBP16.96■□□□□ 0.31
SRRT-219ENST00000641476 BAZ2BQ9UIF8 2168 aaKnown RBP16.96■□□□□ 0.31
SRRT-219ENST00000641476 LCHNA4D1U4 455 aa16.95■□□□□ 0.3
SRRT-219ENST00000641476 IQCF3P0C7M6 154 aa16.95■□□□□ 0.3
SRRT-219ENST00000641476 TROAPQ12815 778 aa16.95■□□□□ 0.3
SRRT-219ENST00000641476 CHST3Q7LGC8 479 aa16.95■□□□□ 0.3
SRRT-219ENST00000641476 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms