RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 COA7Q96BR5 231 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 CSRNP2Q9H175 543 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 PCDHB6Q9Y5E3 794 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 OTOFQ9HC10 1997 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 POTEIP0CG38 1075 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 POTEJP0CG39 1038 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 IRX5P78411 483 aaPredicted RBP19.71■□□□□ 0.75
PCF11-207ENST00000624931 RBL2Q08999 1139 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 KARSQ15046 597 aaKnown RBP19.71■□□□□ 0.75
PCF11-207ENST00000624931 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
PCF11-207ENST00000624931 APTXQ7Z2E3 356 aaKnown RBP19.71■□□□□ 0.75
PCF11-207ENST00000624931 TNFRSF25Q93038 417 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 VCPKMTQ9H867 229 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 MRPL44Q9H9J2 332 aaKnown RBP19.71■□□□□ 0.75
PCF11-207ENST00000624931 BRMS1Q9HCU9 246 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 GOPCQ9HD26 462 aa19.71■□□□□ 0.75
PCF11-207ENST00000624931 PAPPA2Q9BXP8 1791 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 LRRC10BA6NIK2 292 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 MCM3P25205 808 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 NAPAP54920 295 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
PCF11-207ENST00000624931 SPECC1Q5M775 1068 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 TRMT44Q8IYL2 757 aaKnown RBP19.7■□□□□ 0.74
PCF11-207ENST00000624931 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 SH3GLB2Q9NR46 395 aa19.7■□□□□ 0.74
PCF11-207ENST00000624931 WNT7AO00755 349 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 ATP2B1P20020 1258 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 SEMA3FQ13275 785 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 HOOK2Q96ED9 719 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 PAGE5Q96GU1 130 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 MED15Q96RN5 788 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 LIMA1Q9UHB6 759 aaKnown RBP19.69■□□□□ 0.74
PCF11-207ENST00000624931 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
PCF11-207ENST00000624931 SOWAHDA6NJG2 315 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 IVLP07476 585 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 DPYDQ12882 1025 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
PCF11-207ENST00000624931 QRICH1Q2TAL8 776 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 SUPT20HL1Q3ZLR7 823 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 BEND6Q5SZJ8 279 aaPredicted RBP19.68■□□□□ 0.74
PCF11-207ENST00000624931 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CYP26C1Q6V0L0 522 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 RAD9BQ6WBX8 426 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 MTMR8Q96EF0 704 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 NAPGQ99747 312 aaPredicted RBP19.68■□□□□ 0.74
PCF11-207ENST00000624931 DESI2Q9BSY9 194 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 SYNPO2Q9UMS6 1093 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 PNMA6FA0A0J9YX94 578 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CTAGE15A4D2H0 777 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 USP2O75604 605 aaPredicted RBP19.68■□□□□ 0.74
PCF11-207ENST00000624931 CTAGE8P0CG41 777 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 GRIN1Q05586 938 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
PCF11-207ENST00000624931 CTAGE6Q86UF2 777 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CTAGE4Q8IX94 777 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 BLIDQ8IZY5 108 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CCDC148Q8NFR7 591 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 CDCA5Q96FF9 252 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 TMEM51Q9NW97 253 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 RMND1Q9NWS8 449 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 ADAM21Q9UKJ8 722 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 PCDHA4Q9UN74 947 aa19.68■□□□□ 0.74
PCF11-207ENST00000624931 ZBTB5O15062 677 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 MTMR2Q13614 643 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 ZSCAN26Q16670 478 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 ZNF569Q5MCW4 686 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 MOB2Q70IA6 237 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 SH2D4AQ9H788 454 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 LZTFL1Q9NQ48 299 aa19.67■□□□□ 0.74
PCF11-207ENST00000624931 PPP1R3GB7ZBB8 358 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 TEX33O43247 280 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 RPS6KA5O75582 802 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 PTPRAP18433 802 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 CALML3P27482 149 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 PIK3AP1Q6ZUJ8 805 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.66■□□□□ 0.74
PCF11-207ENST00000624931 ANKZF1Q9H8Y5 726 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 PICK1Q9NRD5 415 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 FBXO28Q9NVF7 368 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 RWDD2AQ9UIY3 292 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 PRR12Q9ULL5 1215 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 L1RE1Q9UN81 338 aa19.66■□□□□ 0.74
PCF11-207ENST00000624931 IQCA1LA6NCM1 817 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 SMCO2A6NFE2 343 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 M0R2N6 131 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 TRAPPC10P48553 1259 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 SPP2Q13103 211 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 HSP90AA4PQ58FG1 418 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 LEKR1Q6ZMV7 388 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 DAGLBQ8NCG7 672 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 ZMYND12Q9H0C1 365 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 EPC1Q9H2F5 836 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 PCDHA6Q9UN73 950 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 PCDHA8Q9Y5H6 950 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 ACTN2P35609 894 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 MTF1Q14872 753 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 BTNL9Q6UXG8 535 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms