RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 SMPD1P17405 629 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 ITGB5P18084 799 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 CNGA1P29973 690 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 SREBF1P36956 1147 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
FARP1-230ENST00000600380 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 COPS5Q92905 334 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 ABHD16BQ9H3Z7 469 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
FARP1-230ENST00000600380 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 BRCA2P51587 3418 aa13.54□□□□□ -0.24
FARP1-230ENST00000600380 WNT7AO00755 349 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 SEPT4O43236 478 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 EIF3JO75822 258 aaKnown RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 CCND2P30279 289 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 SP2Q02086 613 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 STXBP2Q15833 593 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 PCNX4Q63HM2 1172 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 VTA1Q9NP79 307 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 TELO2Q9Y4R8 837 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.53□□□□□ -0.24
FARP1-230ENST00000600380 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
FARP1-230ENST00000600380 FAM86B1E9PN63 330 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 CTAGE5O15320 804 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 FAM86B2P0C5J1 330 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 KRT2P35908 639 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
FARP1-230ENST00000600380 WDR11Q9BZH6 1224 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 DDX20Q9UHI6 824 aaKnown RBP13.52□□□□□ -0.25
FARP1-230ENST00000600380 FAM184BQ9ULE4 1060 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
FARP1-230ENST00000600380 MYH7BA7E2Y1 1941 aa13.52□□□□□ -0.25
FARP1-230ENST00000600380 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 SPATA31C2B4DYI2 1134 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 SORBS3O60504 671 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 ATP9AO75110 1047 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 GJB1P08034 283 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 CYP3A4P08684 503 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 ARP10275 920 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 XBP1P17861 261 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 EN2P19622 333 aaPredicted RBP13.51□□□□□ -0.25
FARP1-230ENST00000600380 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
FARP1-230ENST00000600380 TNFAIP2Q03169 654 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 TRIM29Q14134 588 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 INF2Q27J81 1249 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 IQSEC1Q6DN90 963 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 PIK3AP1Q6ZUJ8 805 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
FARP1-230ENST00000600380 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
FARP1-230ENST00000600380 DDX41Q9UJV9 622 aaKnown RBP13.51□□□□□ -0.25
FARP1-230ENST00000600380 IGLV3-22A0A075B6J6 115 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 CCDC85CA6NKD9 419 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 MEIS1O00470 390 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 SGPL1O95470 568 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 TDP2O95551 362 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 PGK1P00558 417 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 AKR1A1P14550 325 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 SOX10P56693 466 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
FARP1-230ENST00000600380 XRRA1Q6P2D8 792 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 LENG9Q96B70 501 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 JADE2Q9NQC1 790 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
FARP1-230ENST00000600380 KIAA1217Q5T5P2 1943 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 SYNRGQ9UMZ2 1314 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 B4DLN1 442 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 DYNC1LI2O43237 492 aaPredicted RBP13.49□□□□□ -0.25
FARP1-230ENST00000600380 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
FARP1-230ENST00000600380 SYT1P21579 422 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 ICAM3P32942 547 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 CIITAP33076 1130 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 GJA8P48165 433 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
FARP1-230ENST00000600380 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 SCFD2Q8WU76 684 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 GJA10Q969M2 543 aa13.49□□□□□ -0.25
FARP1-230ENST00000600380 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
FARP1-230ENST00000600380 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms