RNA–Protein interactions for RNA: ENST00000592396.1

SAFB-212, Transcript of scaffold attachment factor B, humanhuman

TSL 4

Gene SAFB, Length 620 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-212ENST00000592396 STXBP2Q15833 593 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 ARHGEF16Q5VV41 709 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 GPR153Q6NV75 609 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 PPP1R18Q6NYC8 613 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 CCDC62Q6P9F0 684 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 CXCL17Q6UXB2 119 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 SYNE3Q6ZMZ3 975 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 TMTC3Q6ZXV5 915 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 DHX32Q7L7V1 743 aaKnown RBP6.95□□□□□ -1.3
SAFB-212ENST00000592396 FAM126BQ8IXS8 530 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 ZNF713Q8N859 430 aaPredicted RBP6.95□□□□□ -1.3
SAFB-212ENST00000592396 SLC43A3Q8NBI5 491 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 KCNB2Q92953 911 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
SAFB-212ENST00000592396 TAAR1Q96RJ0 339 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 PDCD2LQ9BRP1 358 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 GPHNQ9NQX3 736 aaPredicted RBP6.95□□□□□ -1.3
SAFB-212ENST00000592396 RBM28Q9NW13 759 aaKnown RBP6.95□□□□□ -1.3
SAFB-212ENST00000592396 PPP4R2Q9NY27 417 aa6.95□□□□□ -1.3
SAFB-212ENST00000592396 CHD7Q9P2D1 2997 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 TRIM43BA6NCK2 446 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 ZBTB43O43298 467 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 STAM2O75886 525 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 CD4P01730 458 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 RAG1P15918 1043 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 RXRAP19793 462 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 HOXA13P31271 388 aaPredicted RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 EXOSC10Q01780 885 aaKnown RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 FPGSQ05932 587 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 ARHGAP1Q07960 439 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 FAAP100Q0VG06 881 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 ITGA7Q13683 1181 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 COL9A3Q14050 684 aaPredicted RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 PGM5Q15124 567 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 RTN1Q16799 776 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 GNPTABQ3T906 1256 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 SH3RF1Q7Z6J0 888 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 RASEFQ8IZ41 740 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 FANCBQ8NB91 859 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 TBC1D5Q92609 795 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 CUL5Q93034 780 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 TRIM43Q96BQ3 446 aaPredicted RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 MTG1Q9BT17 334 aaPredicted RBP6.94□□□□□ -1.3
SAFB-212ENST00000592396 LRRC2Q9BYS8 371 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
SAFB-212ENST00000592396 NCOR1O75376 2440 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 KIAA1671Q9BY89 1806 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 KLF18A0A0U1RQI7 1052 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 GOLGA8AA7E2F4 631 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 GOLGA8BA8MQT2 603 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 SOX1O00570 391 aaPredicted RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 RGS20O76081 388 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 ARIH2O95376 493 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 TIMP1P01033 207 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 MMP3P08254 477 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 MYL3P08590 195 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 PTGS1P23219 599 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 PTPN11Q06124 597 aaPredicted RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 TMEM63BQ5T3F8 832 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 XRRA1Q6P2D8 792 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 NFRKBQ6P4R8 1299 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 BLOC1S2Q6QNY1 142 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 FBXL16Q8N461 479 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 SRBD1Q8N5C6 995 aaKnown RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 PPTC7Q8NI37 304 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 SMARCC2Q8TAQ2 1214 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 BADQ92934 168 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 VTI1AQ96AJ9 217 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 TCEANC2Q96MN5 208 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 JAKMIP1Q96N16 626 aaKnown RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 INPP4AQ96PE3 977 aaPredicted RBP6.93□□□□□ -1.3
SAFB-212ENST00000592396 SNX14Q9Y5W7 946 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 MRVI1Q9Y6F6 885 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 ATG2AQ2TAZ0 1938 aa6.93□□□□□ -1.3
SAFB-212ENST00000592396 CCDC196A0A1B0GTZ2 297 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 B4GALT4O60513 344 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 F2P00734 622 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 SUPT20HL2P0C7V6 817 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 TGFB3P10600 412 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
SAFB-212ENST00000592396 CASTP20810 708 aaKnown RBP6.92□□□□□ -1.3
SAFB-212ENST00000592396 UBA1P22314 1058 aaKnown RBP6.92□□□□□ -1.3
SAFB-212ENST00000592396 RPS6KB1P23443 525 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 ITGB8P26012 769 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 PSMA5P28066 241 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 ICAM3P32942 547 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 PSMC6P62333 389 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 FGD1P98174 961 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 PPIGQ13427 754 aaKnown RBP eCLIP6.92□□□□□ -1.3
SAFB-212ENST00000592396 DGKDQ16760 1214 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 MFSD5Q6N075 450 aa6.92□□□□□ -1.3
SAFB-212ENST00000592396 PSRC1Q6PGN9 363 aaPredicted RBP6.92□□□□□ -1.3
SAFB-212ENST00000592396 SEPT14Q6ZU15 432 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms