RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 FGD1P98174 961 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 PGM5Q15124 567 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 KCNV1Q6PIU1 500 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 DHX32Q7L7V1 743 aaKnown RBP20.05■□□□□ 0.8
MBD1-213ENST00000586118 RAB11FIP4Q86YS3 637 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 SMARCC2Q8TAQ2 1214 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 AFG1LQ8WV93 481 aa20.05■□□□□ 0.8
MBD1-213ENST00000586118 ALDH8A1Q9H2A2 487 aaPredicted RBP20.05■□□□□ 0.8
MBD1-213ENST00000586118 B4GALT4O60513 344 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 MMP3P08254 477 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 ARHGAP1Q07960 439 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
MBD1-213ENST00000586118 TSGA10IPQ3SY00 556 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 TMTC3Q6ZXV5 915 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
MBD1-213ENST00000586118 FANCBQ8NB91 859 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 TRPV6Q9H1D0 765 aa20.04■□□□□ 0.8
MBD1-213ENST00000586118 REC8O95072 547 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 EPHB4P54760 987 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 CHMP4BP1P59074 171 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 NBPF20Q3BBV1 942 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 GNPTABQ3T906 1256 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 NFRKBQ6P4R8 1299 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 VSIG10LQ86VR7 867 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 DHX37Q8IY37 1157 aaKnown RBP20.03■□□□□ 0.8
MBD1-213ENST00000586118 RASEFQ8IZ41 740 aa20.03■□□□□ 0.8
MBD1-213ENST00000586118 CMTR1Q8N1G2 835 aaKnown RBP20.03■□□□□ 0.8
MBD1-213ENST00000586118 RBM28Q9NW13 759 aaKnown RBP20.03■□□□□ 0.8
MBD1-213ENST00000586118 DDX41Q9UJV9 622 aaKnown RBP20.03■□□□□ 0.8
MBD1-213ENST00000586118 ZBTB43O43298 467 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 CSF2RAP15509 400 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
MBD1-213ENST00000586118 CYP2C18P33260 490 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 LAMC2Q13753 1193 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 DGKDQ16760 1214 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 PSRC1Q6PGN9 363 aaPredicted RBP20.02■□□□□ 0.8
MBD1-213ENST00000586118 CCDC82Q8N4S0 544 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 IL31RAQ8NI17 732 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 EMID1Q96A84 441 aaPredicted RBP20.02■□□□□ 0.8
MBD1-213ENST00000586118 TCEANC2Q96MN5 208 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 TRMT13Q9NUP7 481 aaKnown RBP20.02■□□□□ 0.8
MBD1-213ENST00000586118 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
MBD1-213ENST00000586118 NOD1Q9Y239 953 aa20.02■□□□□ 0.8
MBD1-213ENST00000586118 GOLGA8AA7E2F4 631 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 GOLGA8BA8MQT2 603 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 STAM2O75886 525 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 SMAD3P84022 425 aaKnown RBP20.01■□□□□ 0.79
MBD1-213ENST00000586118 EXOSC10Q01780 885 aaKnown RBP20.01■□□□□ 0.79
MBD1-213ENST00000586118 PTPN11Q06124 597 aaPredicted RBP20.01■□□□□ 0.79
MBD1-213ENST00000586118 RTN1Q16799 776 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 ZNF697Q5TEC3 545 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 Q7L0L9 218 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 PPTC7Q8NI37 304 aa20.01■□□□□ 0.79
MBD1-213ENST00000586118 JAKMIP1Q96N16 626 aaKnown RBP20.01■□□□□ 0.79
MBD1-213ENST00000586118 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
MBD1-213ENST00000586118 KLF18A0A0U1RQI7 1052 aa20■□□□□ 0.79
MBD1-213ENST00000586118 HEATR3Q7Z4Q2 680 aa20■□□□□ 0.79
MBD1-213ENST00000586118 BUD13Q9BRD0 619 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■□□□ 13
MBD1-213ENST00000586118 KATNAL1Q9BW62 490 aa20■□□□□ 0.79
MBD1-213ENST00000586118 PSTPIP2Q9H939 334 aa20■□□□□ 0.79
MBD1-213ENST00000586118 COL6A3P12111 3177 aa20■□□□□ 0.79
MBD1-213ENST00000586118 KIAA1217Q5T5P2 1943 aa20■□□□□ 0.79
MBD1-213ENST00000586118 FRMPD4Q14CM0 1322 aa20■□□□□ 0.79
MBD1-213ENST00000586118 SCN10AQ9Y5Y9 1956 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 hCG_1642624A0A1W2PR95 340 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 PIK3CDO00329 1044 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 RGS20O76081 388 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 GGPS1O95749 300 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 TGFB3P10600 412 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 UBA1P22314 1058 aaKnown RBP19.99■□□□□ 0.79
MBD1-213ENST00000586118 CCL23P55773 120 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 FAM109BQ6ICB4 259 aaPredicted RBP19.99■□□□□ 0.79
MBD1-213ENST00000586118 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 SPATA33Q96N06 139 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 MTIF3Q9H2K0 278 aaKnown RBP19.99■□□□□ 0.79
MBD1-213ENST00000586118 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 IL23AQ9NPF7 189 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 UMODL1Q5DID0 1318 aa19.99■□□□□ 0.79
MBD1-213ENST00000586118 CYP2C9P11712 490 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 HSPA4P34932 840 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 RCAN1P53805 252 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 CELF3Q5SZQ8 465 aaKnown RBP19.98■□□□□ 0.79
MBD1-213ENST00000586118 XRRA1Q6P2D8 792 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 BLOC1S2Q6QNY1 142 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 CCDC155Q8N6L0 562 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 CNTNAP5Q8WYK1 1306 aa19.98■□□□□ 0.79
MBD1-213ENST00000586118 MEIS2O14770 477 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 SORBS3O60504 671 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 ACRP10323 421 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 PSMA5P28066 241 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 TMEM240Q5SV17 173 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 MYSM1Q5VVJ2 828 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 RPUSD2Q8IZ73 545 aaKnown RBP19.97■□□□□ 0.79
MBD1-213ENST00000586118 C7orf31Q8N865 590 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 PPP1R13LQ8WUF5 828 aa19.97■□□□□ 0.79
MBD1-213ENST00000586118 GPKOWQ92917 476 aaPredicted RBP eCLIP19.97■□□□□ 0.79
MBD1-213ENST00000586118 ZFP91Q96JP5 570 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms