RNA–Protein interactions for RNA: ENST00000583777.5

TSPO-206, Transcript of translocator protein, humanhuman

TSL 1 (best) BASIC

Gene TSPO, Length 636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-206ENST00000583777 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
TSPO-206ENST00000583777 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
TSPO-206ENST00000583777 DDAH1O94760 285 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 GH1P01241 217 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 SP2Q02086 613 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
TSPO-206ENST00000583777 SCLYQ96I15 445 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
TSPO-206ENST00000583777 MAP3K20Q9NYL2 800 aaKnown RBP16.98■□□□□ 0.31
TSPO-206ENST00000583777 SCN5AQ14524 2016 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 MYCLP12524 364 aaPredicted RBP16.97■□□□□ 0.31
TSPO-206ENST00000583777 MCM5P33992 734 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 PBX2P40425 430 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
TSPO-206ENST00000583777 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 BCAS3Q9H6U6 928 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 GBF1Q92538 1859 aa16.97■□□□□ 0.31
TSPO-206ENST00000583777 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
TSPO-206ENST00000583777 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
TSPO-206ENST00000583777 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
TSPO-206ENST00000583777 SORBS3O60504 671 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 ADCK5Q3MIX3 580 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 NFRKBQ6P4R8 1299 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.31
TSPO-206ENST00000583777 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 MRVI1Q9Y6F6 885 aa16.96■□□□□ 0.31
TSPO-206ENST00000583777 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.3
TSPO-206ENST00000583777 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.3
TSPO-206ENST00000583777 KPNA6O60684 536 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 DNAJB2P25686 324 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 LIFRP42702 1097 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 MRPS9P82933 396 aaKnown RBP16.95■□□□□ 0.3
TSPO-206ENST00000583777 BRDTQ58F21 947 aaPredicted RBP16.95■□□□□ 0.3
TSPO-206ENST00000583777 PSRC1Q6PGN9 363 aaPredicted RBP16.95■□□□□ 0.3
TSPO-206ENST00000583777 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
TSPO-206ENST00000583777 HERVK_113Q902F9 699 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 PBX4Q9BYU1 374 aa16.95■□□□□ 0.3
TSPO-206ENST00000583777 hCG_1642624A0A1W2PR95 340 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 MEIS2O14770 477 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 SUPT20HL2P0C7V6 817 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 ZNF286BP0CG31 522 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 UBA1P22314 1058 aaKnown RBP16.94■□□□□ 0.3
TSPO-206ENST00000583777 SMARCA1P28370 1054 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 CHMP4BP1P59074 171 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 EXOSC10Q01780 885 aaKnown RBP16.94■□□□□ 0.3
TSPO-206ENST00000583777 HIC1Q14526 733 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
TSPO-206ENST00000583777 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 NFXL1Q6ZNB6 911 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 OTOP2Q7RTS6 562 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
TSPO-206ENST00000583777 UNC80Q8N2C7 3258 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 CCDC69A6NI79 296 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 FGBP02675 491 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 HOXD8P13378 290 aaPredicted RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 PTPN11Q06124 597 aaPredicted RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 GRIN2CQ14957 1233 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 PPTC7Q8NI37 304 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 DHX38Q92620 1227 aaKnown RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
TSPO-206ENST00000583777 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
TSPO-206ENST00000583777 CHD9Q3L8U1 2897 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 HAS3O00219 553 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 CDC45O75419 566 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 GGPS1O95749 300 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 F2P00734 622 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
TSPO-206ENST00000583777 CCND2P30279 289 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 KIF5BP33176 963 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 TRAF1Q13077 416 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 GPNMBQ14956 572 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 DGKDQ16760 1214 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 SESTD1Q86VW0 696 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
TSPO-206ENST00000583777 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms